Transcript Information: R_Transcript_323152.p1


Annotated TAIR IDAT5G47010.1
Annotated Gene NameRNA helicase, putative
Annotated Gene Symbol(s)UPF1, LBA1, ATUPF1
Annotation TypeOrtholog
Chromosome Positionchr5:19072009-19078856 | Forward length=1254
E-Value2.8E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.50702669318663
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_323152.p1 GENE.R_Transcript_323152~~R_Transcript_323152.p1 ORF type:5prime_partial len:108 (-),score=21.68 R_Transcript_323152:41-364(-)
TTTACCCATGTGATACACAATTGCAGCAGAAGTGACGGTTTTCCCAGTGCCAGGAGGACCTTGAATCAAGCTAATAGGCTTCTGAAGAACGCTCTTTACAGCAAAGACCTCAAATTAGTACTGGTGGGGGAGGAATTTGGTGCTGAGTATGGTGGTATTGCCTTCCAGTATTCTCAATGGTGGTCGTGGCGATGGAACAGAGAGGAGAGAGGTAGGCGATGGTGGTGCCTTCCAGTAGTTCTCGGTGGTGGTGGTGGTAGGCGATGGAGTGTTGGTGATGGGTGCGTCGATGGTTATCTGATGGGAGAGGAAGAAGGAGAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_323152.p1 GENE.R_Transcript_323152~~R_Transcript_323152.p1 ORF type:5prime_partial len:108 (-),score=21.68 R_Transcript_323152:41-364(-)
FTHVIHNCSRSDGFPSARRTLNQANRLLKNALYSKDLKLVLVGEEFGAEYGGIAFQYSQWWSWRWNREERGRRWWCLPVVLGGGGGRRWSVGDGCVDGYLMGEEEGE*

Click here to download the sequence:
Link to NCBI Protein BLAST