Transcript Information: R_Transcript_32318.p1


Annotated TAIR IDAT5G60600.1
Annotated Gene Name4-hydroxy-3-methylbut-2-enyl diphosphate synthase
Annotated Gene Symbol(s)GCPE, ISPG, CSB3, CLB4, HDS
Annotation TypeOrtholog
Chromosome Positionchr5:24359447-24363274 | Forward length=741
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 125.004056102355
Replicate 221.201743668904
Replicate 322.189501193925
Condition 2: 8 Hour
Replicate 115.812789496264
Replicate 218.903915763977
Replicate 321.348567481121
Condition 3: 24 Hour
Replicate 122.598389502026
Replicate 221.40784424604
Replicate 322.787199400057


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_32318.p1 GENE.R_Transcript_32318~~R_Transcript_32318.p1 ORF type:complete len:511 (+),score=102.60,GcpE|PF04551.10|2.2e-102 R_Transcript_32318:1046-2578(+)
ATGCGAATAGGGACAAATCATGGAAGTCTTTCAGATCGTATAATGAGCTATTATGGGGATTCTCCCCGCGGAATGGTTGAATCTGCATTTGAGTTCGCGAGAATATGCCGGAAGATGGACTACCATAATTTTGTTTTTTCCATGAAAGCAAGCAATCCAGTTGTAATGGTTGAAGCTTATCGGTTATTGGTAGCAGAAATGTATTTGCAAGGGTGGGATTATCCATTACACTTGGGAGTAACAGAAGCTGGTGAAGGAGAAGATGGACGAATGAAATCTGCAATCGGGATTGGGACCCTTCTTCAGGATGGTTTGGGGGATACAATTAGGGTCTCTCTCACTGAAGCACCGGAGGAGGAGATAGATCCCTGCAGAAGGCTGGCCAACCTTGGTAGCAGAGCAGCTGAACTTCAACAAGGAGTGGCACCATTTGAAGAAAAACATAGACATTACTTTGAGTTTCAACGCAGAACTGGTGATTTACCTAGTCAGAAACAGGGTGAGGAAGTGGACTATAGAGGGGTCCTACACCGTGATGGTTCTGTTCTCATGACCGTTTCCCTTGACCAGTTGAAGACACCTGAACTCCTATACAAGTCATTAGCAGCAAAGCTTGTTGTTGGCATGCCTTTTAAGGATCTGGCTACTGTAGACTCCATTCTACTGAAGGAGCTCCCACCAGCAGATGATGCTAATGCTAGATTAGCCCTCAAGAGGTTGATAGATATAAGCATGGGTGTCATCGCGCCTTTGTCTGAGCAACTGACAAAGCCCTTGCCCAATGCAATTGCTTTGGTGAACCTTAAGGAGATTTCTACTGGTGCATACAAGCTTTTACCAGAAGGAACCCGCTTAGCAGTATCAATCAGAGGTGATGAACCCTATGAAGAACTTGAAATCCTCAAAGATGTAGATGCTACAATGCTTCTGCATGATCTGCCTTGTACTGAAGAGAAAACCAGTAGGGTGCATGCAGCACGAAGGCTATTTGAGTACCTATCAGACAATTCCAATTCTCTAAACTTCCCTGTAATTCACCATATCAAGTTCTCCTCAGGGACCCACAGGGACGATTTAGTGATTCGTGCTGGTACCTATGCTGGAGCCCTTCTTGTCGATGGACTAGGAGATGGTGTTCTTTTGGAGGCTCCTGACCAAGAGTTTGAGTTTCTGAGAAATTCATCTTTTAACTTGCTTCAGGGTTGCAGAATGCGGAATACCAAAACGGAATATGTCTCATGTCCATCTTGTGGAAGGACACTGTTTGATCTCCAAGAAGTAAGCGCACAAATACGAGAGAAGACATCACATTTACCTGGTGTTTCTATTGCAATAATGGGTTGCATCGTGAATGGTCCTGGGGAAATGGCGGATGCGGACTTTGGTTATGTCGGCGGTGCTCCTGGAAAAATTGACTTATATGTAGGCAAGACGGTGGTGAAGCGAGGAATTGCAATGGAGCAAGCTACTGATGCATTGATCGACCTAATTAAAGAACATGGACGGTGGGTGGATCCTCCGGAGGAAGAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_32318.p1 GENE.R_Transcript_32318~~R_Transcript_32318.p1 ORF type:complete len:511 (+),score=102.60,GcpE|PF04551.10|2.2e-102 R_Transcript_32318:1046-2578(+)
MRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKMDYHNFVFSMKASNPVVMVEAYRLLVAEMYLQGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEAPEEEIDPCRRLANLGSRAAELQQGVAPFEEKHRHYFEFQRRTGDLPSQKQGEEVDYRGVLHRDGSVLMTVSLDQLKTPELLYKSLAAKLVVGMPFKDLATVDSILLKELPPADDANARLALKRLIDISMGVIAPLSEQLTKPLPNAIALVNLKEISTGAYKLLPEGTRLAVSIRGDEPYEELEILKDVDATMLLHDLPCTEEKTSRVHAARRLFEYLSDNSNSLNFPVIHHIKFSSGTHRDDLVIRAGTYAGALLVDGLGDGVLLEAPDQEFEFLRNSSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEVSAQIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEQATDALIDLIKEHGRWVDPPEEE*

Click here to download the sequence:
Link to NCBI Protein BLAST