Transcript Information: R_Transcript_32318.p2


Annotated TAIR IDAT5G60600.1
Annotated Gene Name4-hydroxy-3-methylbut-2-enyl diphosphate synthase
Annotated Gene Symbol(s)GCPE, ISPG, CSB3, CLB4, HDS
Annotation TypeOrtholog
Chromosome Positionchr5:24359447-24363274 | Forward length=741
E-Value1.3E-120
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.7866939587003
Replicate 25.8968333084071
Replicate 39.2601705175935
Condition 2: 8 Hour
Replicate 14.6887826494725
Replicate 25.3285505664102
Replicate 310.350280098433
Condition 3: 24 Hour
Replicate 19.085430094368
Replicate 26.1003907569682
Replicate 310.245308576846


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_32318.p2 GENE.R_Transcript_32318~~R_Transcript_32318.p2 ORF type:complete len:235 (+),score=52.65,GcpE|PF04551.10|2.3e-43 R_Transcript_32318:351-1055(+)
ATGGCAACTGGGGTAATTCAATCTCCAGTATGGCATGTGAGGAGCAAAGATTTTGAGTTGGCATCTGTGAGAAATGTTGATTTTGTGAAGATTTCAAATCTTAAAAGGGTTAAGTCTTCAAGAACTAAGACATCTGTGATTAAAAATTCAAACCCGGGTTCTGATATTGCTGAGCTTCAGCCTGCATCGGAGGGAAGCCGTCTATTAGTACCTCGGCAGAAGTATTGTGAGTCTCTGCATAAAACCGTGCGGAGAAAAACTTGCACTGTGATGGTGGGAAATGTGGCCATTGGCAGTGACCACCCTATCAGGATACAGACAATGACAACAACTGATACGAAAGACGTTGCTGCCACAGTTGAACAGGTCATGAGAATTGCTGACAGTGGAGCAGATATTGTTCGAATAACAGTGCAAGGAAAGAAAGAGGCAGATGCATGTTTTGAAATTAAAAACACTCTTGTCCAGAAAAACTACAATATTCCTTTAGTGGCAGATATTCATTTTGCTCCTTCTGTTGCAATGCGGGTTGCTGAATGCTTTGAGAAAATTCGAGTTAATCCTGGGAACTTTGCTGACAGAAGAGCCCAGTTTGAGAAGCTAGATTATACAGACGAGGACTATCAAAAGGAGCTTGAACACATTGAAGAGGTTTTTGCCCCATTGGTTAGAAGTGTAAAAAATATGGTAGAGCTATGCGAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_32318.p2 GENE.R_Transcript_32318~~R_Transcript_32318.p2 ORF type:complete len:235 (+),score=52.65,GcpE|PF04551.10|2.3e-43 R_Transcript_32318:351-1055(+)
MATGVIQSPVWHVRSKDFELASVRNVDFVKISNLKRVKSSRTKTSVIKNSNPGSDIAELQPASEGSRLLVPRQKYCESLHKTVRRKTCTVMVGNVAIGSDHPIRIQTMTTTDTKDVAATVEQVMRIADSGADIVRITVQGKKEADACFEIKNTLVQKNYNIPLVADIHFAPSVAMRVAECFEKIRVNPGNFADRRAQFEKLDYTDEDYQKELEHIEEVFAPLVRSVKNMVELCE*

Click here to download the sequence:
Link to NCBI Protein BLAST