Transcript Information: R_Transcript_32319.p1


Annotated TAIR IDAT5G60600.1
Annotated Gene Name4-hydroxy-3-methylbut-2-enyl diphosphate synthase
Annotated Gene Symbol(s)GCPE, ISPG, CSB3, CLB4, HDS
Annotation TypeOrtholog
Chromosome Positionchr5:24359447-24363274 | Forward length=741
E-Value4.6E-158
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.55253422148153
Replicate 30
Condition 2: 8 Hour
Replicate 11.1966776102037
Replicate 20.33625386227347
Replicate 30.40943482602377
Condition 3: 24 Hour
Replicate 11.5535358274386
Replicate 20.58040154975203
Replicate 30.24685381225824


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_32319.p1 GENE.R_Transcript_32319~~R_Transcript_32319.p1 ORF type:complete len:266 (+),score=50.41,GcpE|PF04551.10|8.8e-59 R_Transcript_32319:1044-1841(+)
ATGCGAATAGGGACAAATCATGGAAGTCTTTCAGATCGTATAATGAGCTATTATGGGGATTCTCCCCGCGGAATGGTTGAATCTGCATTTGAGTTCGCGAGAATATGCCGGAAGATGGACTACCATAATTTTGTTTTTTCCATGAAAGCAAGCAATCCAGTTGTAATGGTTGAAGCTTATCGGTTATTGGTAGCAGAAATGTATTTGCAAGGGTGGGATTATCCATTACACTTGGGAGTAACAGAAGCTGGTGAAGGAGAAGATGGACGAATGAAATCTGCAATCGGGATTGGGACCCTTCTTCAGGATGGTTTGGGGGATACAATTAGGGTCTCTCTCACTGAAGCACCGGAGGAGGAGATAGATCCCTGCAGAAGGCTGGCCAACCTTGGTAGCAGAGCAGCTGAACTTCAACAAGGAGTGGCACCATTTGAAGAAAAACATAGACATTACTTTGAGTTTCAACGCAGAACTGGTGATTTACCTAGTCAGAAACAGGGTGAGGAAGTGGACTATAGAGGGGTCCTACACCGTGATGGTTCTGTTCTCATGACCGTTTCCCTTGACCAGTTGAAGACACCTGAACTCCTATACAAGTCATTAGCAGCAAAGCTTGTTGTTGGCATGCCTTTTAAGGATCTGGCTACTGTAGACTCCATTCTACTGAAGGAGCTCCCACCAGCAGATGATGCTAATGCTGTAAGCAATCTCCCTAGTCCCCACCCCCTCCCTCCCCCGAAATTTTCCTTTATTTCATTGATTGAGACATTTGTCATTCTCTTCTTGTTGAAATGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_32319.p1 GENE.R_Transcript_32319~~R_Transcript_32319.p1 ORF type:complete len:266 (+),score=50.41,GcpE|PF04551.10|8.8e-59 R_Transcript_32319:1044-1841(+)
MRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKMDYHNFVFSMKASNPVVMVEAYRLLVAEMYLQGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEAPEEEIDPCRRLANLGSRAAELQQGVAPFEEKHRHYFEFQRRTGDLPSQKQGEEVDYRGVLHRDGSVLMTVSLDQLKTPELLYKSLAAKLVVGMPFKDLATVDSILLKELPPADDANAVSNLPSPHPLPPPKFSFISLIETFVILFLLKC*

Click here to download the sequence:
Link to NCBI Protein BLAST