Transcript Information: R_Transcript_323317.p1


Annotated TAIR IDAT3G62690.1
Annotated Gene NameAtL5
Annotated Gene Symbol(s)ATL5
Annotation TypeOrtholog
Chromosome Positionchr3:23185829-23186602 | Reverse length=257
E-Value3.9E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.161296797967
Replicate 22.3933606692153
Replicate 32.2550674317456
Condition 2: 8 Hour
Replicate 11.1418278990943
Replicate 21.3903138968613
Replicate 31.8809959192111
Condition 3: 24 Hour
Replicate 13.2117139644975
Replicate 21.9426911976156
Replicate 34.8765352411222


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_323317.p1 GENE.R_Transcript_323317~~R_Transcript_323317.p1 ORF type:complete len:193 (-),score=31.48,zf-RING_2|PF13639.2|1.2e+04,zf-RING_2|PF13639.2|1.1e-15,zf-RING_2|PF13639.2|4.3e+03,zf-RING_11|PF17123.1|2.7e-12,zf-RING_11|PF17123.1|5.4e+02,zf-rbx1|PF12678.3|1.4e-08,zf-rbx1|PF12678.3|7.1e+03,zf-C3HC4_2|PF13923.2|1.3e+04,zf-C3HC4_2|PF13923.2|1.7e-07,zf-C3HC4_2|PF13923.2|3.3e+03,zf-C3HC4|PF00097.21|2.1e-07,zf-C3HC4|PF00097.21|1.6e+04 R_Transcript_323317:769-1347(-)
ATGGCTGCTGCACAGAGGCTTCTTTCTGAAGTTAACACAACATCAGTACCTGCAGAGCATGAAGATTTCACGGCTCTTCGATCCGATTATGTAGTCATCCTTGCTGCTCTCTTTTGTGCTCTTATCTGTGCAATTGGCCTTGCAATGGTAGCTCGATGTTTCTGTCTCCACCGCCGTCTTGAGTTTTTCCTAATGACTCGAACCCGTCCTGCACTATCACCCCCTCCTTCAGGTCTCAACAAGAAGACCCTACAGTTACTGCCAACAACGAAACATGTCAATGAAACAGTCAGTGGCGACAAACAGACTGATTGTGCCATATGTCTGACAGAGTTTTCTGATGGTGATGTCATGAGAATTCTTCCGCGTTGTGGTCATGTCTTTCATGTAACCTGCATTGACACTTGGCTTTTGTCACACTCGTCTTGTCCTTCTTGTCGACAGTTGGTTCTAGTGGTTGCTCGTTGTCAGCACTGTGGTGGACTCTCTGCTAGCCACAGCCTCCCTGGTGCTGAGAATGGTGACAGAGAGAATGATGTAATCTCGAGTCAAGATTATGATCATAGGTTTTTACCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_323317.p1 GENE.R_Transcript_323317~~R_Transcript_323317.p1 ORF type:complete len:193 (-),score=31.48,zf-RING_2|PF13639.2|1.2e+04,zf-RING_2|PF13639.2|1.1e-15,zf-RING_2|PF13639.2|4.3e+03,zf-RING_11|PF17123.1|2.7e-12,zf-RING_11|PF17123.1|5.4e+02,zf-rbx1|PF12678.3|1.4e-08,zf-rbx1|PF12678.3|7.1e+03,zf-C3HC4_2|PF13923.2|1.3e+04,zf-C3HC4_2|PF13923.2|1.7e-07,zf-C3HC4_2|PF13923.2|3.3e+03,zf-C3HC4|PF00097.21|2.1e-07,zf-C3HC4|PF00097.21|1.6e+04 R_Transcript_323317:769-1347(-)
MAAAQRLLSEVNTTSVPAEHEDFTALRSDYVVILAALFCALICAIGLAMVARCFCLHRRLEFFLMTRTRPALSPPPSGLNKKTLQLLPTTKHVNETVSGDKQTDCAICLTEFSDGDVMRILPRCGHVFHVTCIDTWLLSHSSCPSCRQLVLVVARCQHCGGLSASHSLPGAENGDRENDVISSQDYDHRFLP*

Click here to download the sequence:
Link to NCBI Protein BLAST