Transcript Information: R_Transcript_323443.p1


Annotated TAIR IDATMG00860.1
Annotated Gene NameDNA/RNA polymerases superfamily protein
Annotated Gene Symbol(s)ORF158
Annotation TypeHomolog
Chromosome PositionchrM:235916-236392 | Forward length=158
E-Value1E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.19759632968572
Replicate 20.31252950552
Replicate 30.49595101696677
Condition 2: 8 Hour
Replicate 10.16566891033319
Replicate 20.24206637987752
Replicate 30.31931114758461
Condition 3: 24 Hour
Replicate 10.43492462948289
Replicate 20.14922367314328
Replicate 30.20732602545099


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_323443.p1 GENE.R_Transcript_323443~~R_Transcript_323443.p1 ORF type:5prime_partial len:739 (+),score=27.40,RVT_1|PF00078.23|3e-31,RVP|PF00077.16|9.2e-06,RVP|PF00077.16|1.1e+04 R_Transcript_323443:3-2219(+)
ACTGATATCCAATTAGATCAACTTCAAAAATTAAGAGAAATCCTTATACAGGATGAAAAGGAAAAATATTCTCACATAGAGAATGTTACCCTTAAAGATATCTTAAAACAAGTTCCCAATTCTCTTAAGCCATTAACCCTTAGAGACCTTCAGGAAGAAGTCAACAAATTAGATACCCAAATCACGAGACTGAAGGATGAACTAGGACCCATTAAACTAAAAAATATAGAGTTGGAATCTCGTGTAACCCTCCTAGAAAATGACAAATCGCTTGATCAACCCGAGTCAAGCCATCGACGAAGTAATCTACCTCCTTATGAGGATGCGGATTCTAGCGCTATCGCCATTACCGCCCTTACCAAGGTCCCTTATCAAAAATGGCTTACCCCTATTAAGATAAGACTGAGCCCTAATTTCGAAATTAACGAAATTGCTCTTATTGACAGTGGAGCAGACCAAAACTGTATCAAAGAGGATCTTGTTCCTCTAAATTTCAAAGAGAAAACCTTTGAAGCTCTTTATGCAGCTAATGGTCAGCAGCTGAAGATCGATTACAAATTGCCTACTGCTAGTATTATCAACAATGGTTACACAATCAAGACCTCATTCATGTTAATCAAGCAGATGAATAACAGAGTTATTCTTGGGACGCCCTTCTTAACCCAAATTTATCCTTTTTCCATAAATCAAAACGGCTTGCGCTCAGACATTTTGGGTCGAACTATCCATTTTCCATTTCTCACAAAAATTAGTCAAGTGGAAATAGAACTTTTACAGTCTAATACAATATTCCAGCAAGTCAACCAAATATCATCCCTAACCAAAGTCAAAAGACTTCTTACTCACGAGATTACCCATGAACGGGTCGATCATCAGCTGCAGAATCCAGTCATCCAAAACAAGATTTCGATTTTAGAAGAACAAATGAAACGAGAAATTTGTTCTACCCTACCTAATGCTTTTTGGAGTCGAAAGAAGCATACGGTGGATTTGCCTTATGAGAAGGATTTCGATGAAAGACAAATACCAACCAAAGCTAGACCCATACAAATGAACCATGATTGGTTGGAACTTTGCAAAAAAGAAATTCAAGACCTTTTAGATAAAGGACTAATTCGACCTTCTAAGAGTCCTTGGTCCTGTGCGGCTTTCTATGTCTACAACCAAGCTGAAAAGGAACGAGGTGTTCCTCGATTAGTCATTAATTACAAACCCTTAAATAAGGTTTTGAAATGGATTAGATATCCGATTCCTAATAAAAGAGATCTTTTAAAACGTTTGCATTCATCAAAAATTTTTAGTAAGTTCGATATGAAATCCGGATTTTGGCAAATCCAGATTAATGAAAAAGACAGATACAAAACAGCTTTTAACGTTCCATTTGGACAATACGAATGGAATGTAATGCCTTTTGGTTTGAAAAATGCTCCTTCTGAATTTCAAAACATTATGAACGATATTTTCAACCCTTATACCTTATTCATTATAGTTTATATTGATGATGTTTTAATCTTTTCAGATTCTTTAGATCAGCATTTTAAACATTTACAAACATTTCTTTATATAGTAAAGAAGAACGGACTGGTCGTTTCTCCAACTAAGATCAAACTATTTCAGACAAATATTCGTTTTCTCGGTCATGAGATATACCGAGGCACTATTAAACCTATTTCTAGATCTCTTGAATTTACAGACAAGTTTCCTGATGAAATTCGAGACAAAACTCAATTGCAAAGATTTTTAGGGTGTTTAAATTACGTTTCAGATTTCTTTCCTAACCTTAGACAAATATGTAAACCACTTTATCAGCGTTTACAAAAGAACCCTGTTCCTTGGACAGATTTGCATACAAATACAATTCGAACTTTGAAATCCAAGATTAAAACTTTACCCTGTATCGCAATTCCAAACCCTCTAGCAAGTCTTATAGTCGAGACCGATGCTTCAGACATAGGATTTGGAGGAATACTTAAGCAAAGGTTACCCAATGAAAAGAAAGAAACTTTAGTACGGTACCACTCAGGTCTTTGGAATCCATCCCAACAGAATTATTCTATAATCAAAAAGGAATTACTTTCTGTTGTGCTAAATGTTACAAAATTTCAAGATGATCTCTTCAATAAACATTTCCTTATTCGTGTTGATTGTAAATCTGCAAGAAGCGTTTTACTCAAAGATGTCAAAAATTTTGTATCAAAACAAATATTTGCAAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_323443.p1 GENE.R_Transcript_323443~~R_Transcript_323443.p1 ORF type:5prime_partial len:739 (+),score=27.40,RVT_1|PF00078.23|3e-31,RVP|PF00077.16|9.2e-06,RVP|PF00077.16|1.1e+04 R_Transcript_323443:3-2219(+)
TDIQLDQLQKLREILIQDEKEKYSHIENVTLKDILKQVPNSLKPLTLRDLQEEVNKLDTQITRLKDELGPIKLKNIELESRVTLLENDKSLDQPESSHRRSNLPPYEDADSSAIAITALTKVPYQKWLTPIKIRLSPNFEINEIALIDSGADQNCIKEDLVPLNFKEKTFEALYAANGQQLKIDYKLPTASIINNGYTIKTSFMLIKQMNNRVILGTPFLTQIYPFSINQNGLRSDILGRTIHFPFLTKISQVEIELLQSNTIFQQVNQISSLTKVKRLLTHEITHERVDHQLQNPVIQNKISILEEQMKREICSTLPNAFWSRKKHTVDLPYEKDFDERQIPTKARPIQMNHDWLELCKKEIQDLLDKGLIRPSKSPWSCAAFYVYNQAEKERGVPRLVINYKPLNKVLKWIRYPIPNKRDLLKRLHSSKIFSKFDMKSGFWQIQINEKDRYKTAFNVPFGQYEWNVMPFGLKNAPSEFQNIMNDIFNPYTLFIIVYIDDVLIFSDSLDQHFKHLQTFLYIVKKNGLVVSPTKIKLFQTNIRFLGHEIYRGTIKPISRSLEFTDKFPDEIRDKTQLQRFLGCLNYVSDFFPNLRQICKPLYQRLQKNPVPWTDLHTNTIRTLKSKIKTLPCIAIPNPLASLIVETDASDIGFGGILKQRLPNEKKETLVRYHSGLWNPSQQNYSIIKKELLSVVLNVTKFQDDLFNKHFLIRVDCKSARSVLLKDVKNFVSKQIFAR*

Click here to download the sequence:
Link to NCBI Protein BLAST