Transcript Information: R_Transcript_32481.p1


Annotated TAIR IDAT1G75660.1
Annotated Gene Name5'-3' exoribonuclease 3
Annotated Gene Symbol(s)XRN3, AtXRN3
Annotation TypeHomolog
Chromosome Positionchr1:28408289-28414825 | Forward length=1020
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.0575091003868
Replicate 21.6525846947238
Replicate 32.3114770530931
Condition 2: 8 Hour
Replicate 13.6074029084741
Replicate 23.8358727679128
Replicate 35.7696845059757
Condition 3: 24 Hour
Replicate 13.6139434182864
Replicate 22.4036003634534
Replicate 34.417296606841


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_32481.p1 GENE.R_Transcript_32481~~R_Transcript_32481.p1 ORF type:complete len:991 (+),score=193.15,XRN_N|PF03159.14|5.3e-98,XRN_N|PF03159.14|1.3e+03 R_Transcript_32481:232-3204(+)
ATGGGAGTTCCAGCATTTTACAGGTGGTTGACAAGAAAGTATCCAAAGGTGGTAGAAAATGTTGTGGAAGATAAAGGGGATGATGTTGATATCACCTTTCCCAATCCAAATGGCATAGAATTCGACAACTTGTATTTAGATATGAATGGAATCATTCATCCCTGCTTCCATCCTGATGATCAAGTGTTTCCTCCCACAACCTTTGCCGAGGTGTTCCAGAGGATATTCGACTATGTAGATCGTCTTTTCAGGATTGTAAGGCCTAGGAAATTATTATTTCTTGCCATCGATGGTGTAGCTCCAAGGGCCAAATTAAATCAACAGAGAGCCAGGCGCTACAAAACAGCCAAGGACAATGAGATCATGGAAGAAGTAGAAAATAGGATGCGAGAAGAGTTTGAAAAGAAGGGGAGGAGGGTGCTCCCTAAGCTGAAATCTGAAGTTTGGGATTCGAATATCATAACCCCAGGCACAGAATTCATGGCCGACTTGTCCAAGGCCTTGGAAACTTACATCTCCCAAAGGCTTAAAAATGATCCTAGTTGGAGAAAGATTGAGGTGGTTCTTTCTAATGCTAATGTTCCTGGTGAAGGGGAACACAAGATAATGTCGTTTATACGCAGCCAGCGTAGTCTTCCTGGCTATGATCCAAATACAAGGCATTGCCTTTATGGACTGGATGCTGATCTGATTATGCTTGCATTGGCCTCACATGAACTACATTTTACAATATTACGAGAGGATGTGGTGACAGTGTGTGAACAGAAACCTGATCCTGAATCAGCACTTCTCTGCAGCATAAGGAAGGCTGAAGAGCAATCCTTGGGAAAGTATAGCGGATATGTGAATAAGCCCTTCTTTGACATTCATGATAAAAAACCCTCTTTGCTTAATCAGCCGCAACATTTTCAATTTGTCCATGTTTGGATTTTGAGGGAATACCTTGAGCTTGACATGCAGATAAAAGAAGTACCTGACAAGTTTGTTTTTGATATTGAGCGTATAGTGGATGACTTTGTTTTCATCTGTTTCTTTGCTGGGAATGATTTTCTACCCCACATGCCTACTTTGGAAATACATGAGAACGGCATGGATTTGCTTATGCATGTGTACAAGAAAGAGATGAAAAATCTTGGTGGATATTTGGTTGATTTGCAGAGGGTAAACGATAGACACGGTGGGTATGTTAAGCTGAAACGGGTGGAGAGGTTCATCCTTTCTGTTGGGAGTTTTGAAGAAGAGATTTTCAAGAAAAGAACTGAATTGAGGGAAAGAAAAATCAGACGGATTTTTTGGGAGTTGTCGGAAACAAAAGAAGATGAAATTGAGAACGAAGATATAGAAGCCACCACAGATGATGTGAATTGTCAGAATGACCCTAATCTCTGCCCGTCTGATGAAAATGATCCAGTGATAAATGCTGATATGGGAAGTTATTCAACCTCAGAGCTCCAAGAGATGCTTCAAAACAGTAAGGAGTTGAAAGAGAAGCTAAAGAAATATACTCATAAGGATTCAGATACATTCAGCAATGGGAGTTCGGGTTCGGACAAGGTGAAGTTGGGTACTCCGGGGTGGAAGCAAAGATATTACAAGGAGAAATTTTTGGCGGACCCTGAGGATATCGAAATCAAGAGAAAGGAAATAGTGGAGAAGTACACAGAAGGATTATGTTGGGTTCTGCTTTACTACTATTCTGAGATACCATCCTGGAATTGGTACTACCCATACCACCATGGCCCCTTTGCTTCAGACCTGAAAGGGTTAACACAAGTAAAGGTGAAATTTCAAAAGGGTTCTCCTTTTGACCCGTTTGATCAGCTAATGGCTGTGCTACCACCTAGAAGTGCTCATGCACTTCCGAAACTCTACCAAGAGCTGATGACAGATGGCAGCTCCAGTATCGTAGAGTTCTATCCAAGAGATTTTGAAGTTGATGTTGATGGTAAGAGGTTTATGTGGCAGGGCATCTGCAAGCTTCCCTTCATTAATCAAGAAGTACTTCTCAGCGCAACCAAAAAACTTAAGGGAAAATTAGAGGAGACTGAAGCAAGTAGAAACATTCAGGGAAGTAATCTGTTGCTCACAAGAGGCTCAAGCAGAGCTGATGGAAAGATATGGAGCTATCTCCAGCAGCGGGCAGAAACCAAGGAATTAACAATTCAACCTGCTGAGGGAGAAAATGAAATCTTGTGCTTCAATTTTGAGTTGCCTATAGCCTCAGTGCATATACCGCGTCTCCTAGAAGGGGTTCAACTTCCAGAAAAGATGATACTAGAAAATGACATCATGGAGACGCCTCTTTGGCATGAGTATGCCCGACCACCTATGTCTAGATTTCCAGCACAGGACAGGTACAGGAGGTTTGCGAATGATTCCAAGAAAGAAAGAATGACGCAGGAAACCTCTACTCCCAGGAGCAGAGGATGGTTCAAAGAGCCTACTTTTGATTGCCAGAAAGATGGAACAATGCGTGAAACCTCTGCTCAGAGTTACAAGAAAGAAAGATCGACCCAAGAAACCTCTATATACAAATACCCTGGACCTGGTCGCGGTTTTCATCAAGCTGGTAGGGGGAGGGGAACAAGCTGCAGTGTATCTGAGCCTAGATATGACATTGTCAACCGATGGGCTAAAAAACCAATAGGGTACCAACAATCTTCGATGTCAGCAACCTCATCTGGAGGGTATCATCACAACTCTTCTCCCTCATTCTCTTACAAAAATGCAGTGGAGGAAGCTCCTTACATCAGCAGGGGCATGGAGAACATGAGATTATCACATTCTGACGCAACCGGATCATACAGGAGAAAAGATCGTAGTGCACAGTTTGGTTTCTGGACTTCACGAAGTAGCACAGTTTCTCATGACAATTCCTCTTGGCGGCCAGCTTCTCATGCTAAGCCTACTAGTGAAGGAGGGAACATGCAACAGTTTACTGGCAGGGGAAGAGGCCAATTTAGGCCTAACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_32481.p1 GENE.R_Transcript_32481~~R_Transcript_32481.p1 ORF type:complete len:991 (+),score=193.15,XRN_N|PF03159.14|5.3e-98,XRN_N|PF03159.14|1.3e+03 R_Transcript_32481:232-3204(+)
MGVPAFYRWLTRKYPKVVENVVEDKGDDVDITFPNPNGIEFDNLYLDMNGIIHPCFHPDDQVFPPTTFAEVFQRIFDYVDRLFRIVRPRKLLFLAIDGVAPRAKLNQQRARRYKTAKDNEIMEEVENRMREEFEKKGRRVLPKLKSEVWDSNIITPGTEFMADLSKALETYISQRLKNDPSWRKIEVVLSNANVPGEGEHKIMSFIRSQRSLPGYDPNTRHCLYGLDADLIMLALASHELHFTILREDVVTVCEQKPDPESALLCSIRKAEEQSLGKYSGYVNKPFFDIHDKKPSLLNQPQHFQFVHVWILREYLELDMQIKEVPDKFVFDIERIVDDFVFICFFAGNDFLPHMPTLEIHENGMDLLMHVYKKEMKNLGGYLVDLQRVNDRHGGYVKLKRVERFILSVGSFEEEIFKKRTELRERKIRRIFWELSETKEDEIENEDIEATTDDVNCQNDPNLCPSDENDPVINADMGSYSTSELQEMLQNSKELKEKLKKYTHKDSDTFSNGSSGSDKVKLGTPGWKQRYYKEKFLADPEDIEIKRKEIVEKYTEGLCWVLLYYYSEIPSWNWYYPYHHGPFASDLKGLTQVKVKFQKGSPFDPFDQLMAVLPPRSAHALPKLYQELMTDGSSSIVEFYPRDFEVDVDGKRFMWQGICKLPFINQEVLLSATKKLKGKLEETEASRNIQGSNLLLTRGSSRADGKIWSYLQQRAETKELTIQPAEGENEILCFNFELPIASVHIPRLLEGVQLPEKMILENDIMETPLWHEYARPPMSRFPAQDRYRRFANDSKKERMTQETSTPRSRGWFKEPTFDCQKDGTMRETSAQSYKKERSTQETSIYKYPGPGRGFHQAGRGRGTSCSVSEPRYDIVNRWAKKPIGYQQSSMSATSSGGYHHNSSPSFSYKNAVEEAPYISRGMENMRLSHSDATGSYRRKDRSAQFGFWTSRSSTVSHDNSSWRPASHAKPTSEGGNMQQFTGRGRGQFRPN*

Click here to download the sequence:
Link to NCBI Protein BLAST