Transcript Information: R_Transcript_325558.p2


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value1E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.18776014423076
Condition 2: 8 Hour
Replicate 10.20070381104299
Replicate 20.36657183346206
Replicate 30.14878369360973
Condition 3: 24 Hour
Replicate 10.18817874776807
Replicate 20
Replicate 30.17940741546637


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_325558.p2 GENE.R_Transcript_325558~~R_Transcript_325558.p2 ORF type:complete len:122 (+),score=14.89,RVT_1|PF00078.23|4.7e-14 R_Transcript_325558:865-1230(+)
ATGAAGGCTTTTGGTTTTCCTGAGGAATACATTGGGTGGGTAATGGAGTGTATCACTCATGCAAAATTCTCAATATGCTTCGAGGGATCCCCTAATGGGTATTTTGCTGCTAGTAAAGGAGTGAGGCAGGGAGATCTACTATCTCCTTACCTGTTTGTGTTGGGGATGGAGTACCTAAATAGATTAATGAAACAATATAACGAAGTAAGAGAGTTCAGAAATCATCCCAAACGTCAAAAGATGAAAATGACCCAGCTGATGTCTACTGATGACTTATTAGTTTTCACAAGGGGGGACCAAAGGTCTGTGAAGACATTATATGATTGTTTACATGAGTTTGCAGCTGCTCAGGATTGGTGCCTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_325558.p2 GENE.R_Transcript_325558~~R_Transcript_325558.p2 ORF type:complete len:122 (+),score=14.89,RVT_1|PF00078.23|4.7e-14 R_Transcript_325558:865-1230(+)
MKAFGFPEEYIGWVMECITHAKFSICFEGSPNGYFAASKGVRQGDLLSPYLFVLGMEYLNRLMKQYNEVREFRNHPKRQKMKMTQLMSTDDLLVFTRGDQRSVKTLYDCLHEFAAAQDWCL*

Click here to download the sequence:
Link to NCBI Protein BLAST