Transcript Information: R_Transcript_325821.p1


Annotated TAIR IDAT1G55890.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:20901364-20902560 | Forward length=398
E-Value9E-70
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9971433105672
Replicate 20.85481121287728
Replicate 31.515458466921
Condition 2: 8 Hour
Replicate 11.1214899975838
Replicate 21.5362437906158
Replicate 31.8936794794806
Condition 3: 24 Hour
Replicate 12.2782556790851
Replicate 21.8519683037889
Replicate 32.3948379173959


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_325821.p1 GENE.R_Transcript_325821~~R_Transcript_325821.p1 ORF type:complete len:393 (+),score=52.91,PPR_2|PF13041.2|0.00061,PPR_2|PF13041.2|3.5e-07,PPR_2|PF13041.2|1.3e-05,PPR_2|PF13041.2|1.2e-09,PPR_2|PF13041.2|0.00082,PPR_2|PF13041.2|1.2e-12,PPR_2|PF13041.2|5.4e+02,PPR|PF01535.16|1.7e-05,PPR|PF01535.16|0.032,PPR|PF01535.16|6.5e-07,PPR|PF01535.16|7.8e-06,PPR|PF01535.16|2.8,PPR|PF01535.16|3.7e-06,PPR|PF01535.16|15,PPR_1|PF12854.3|0.013,PPR_1|PF12854.3|4.9,PPR_1|PF12854.3|4.5e-08,PPR_1|PF12854.3|9.6e-06,PPR_1|PF12854.3|19,PPR_1|PF12854.3|3.2e-07,PPR_1|PF12854.3|0.35,PPR_1|PF12854.3|7.7e+02,PPR_3|PF13812.2|1.5e+02,PPR_3|PF13812.2|0.25,PPR_3|PF13812.2|0.21,PPR_3|PF13812.2|0.0033,PPR_3|PF13812.2|0.028,PPR_3|PF13812.2|2.3e+02,PPR_3|PF13812.2|0.061,PPR_3|PF13812.2|6.5e+03 R_Transcript_325821:94-1272(+)
ATGTCAAAGACAAACATATACGCTCGTCTCAATCGCATATTTTCCTCCACCAAGAAAACATTACTTCCCAAAACATTAGCTCCACCCGAAACACCGGAAATCCCAACTAACTACACAGAATCCATTAGCGACCTCTTGAATCAGAGAGACCCATTAAAGCTCGTTCAAAAGTTCAACTCTTTGTCTATTCATCCTTATGTTCGTCGTCGACATAGACTCTATGAAATCATAATCTACCGGCTCACTAGAGCTAATAGATTGTCTCTAATCGAAGATACCCTTGAAACCCAGAAAAAGTACATTTCTGGGCAATGCTTTGCTTCCCGACTTATCACCTTGTATGGTAAAGCCGGCATGTTCGATCATGCACACAAGCTGTTCGACGAAATGCCTGAACGAAAATGTGAACGAGGTGTTAGATCCTTCAATGCCCTTTTGGGAGCTGCTGTTGATTCCAAGAAATTTGACAAGGCTTATGAGCTTTTCCGAGAGCTTCCTTCGAAGATATCGGTTAAACCTAGTGTGGAATCGTATGGTATGGCTGTTAATGCTCTTTGTAAATTGGGTTTGCTTGATGAAGCGATTTCGTTGCTAGATGAGATGGAGGAGAATGGATTGAAAATAAGTATTGTTTGTTTCAATACAATTATGGGTTCTCTTTGTAGGAAGGAGGATTTTGTTGAAGCTGAGAAAATAATGGATAGGATGATCAAGAGTGGTGTGAATCCTGATATGTGCAGTTACATTTGCAGGATGCAAATTCTTACTAGTGAAGGGAAGTTGAGTAATGCAATTGAGTTGTTAGAGCAATTTAAAGGCAAGGGAATAAAACCTAATGTTGGGCTATACAATGTTTTGATTCAAGGGTTCTGTAAAAATGATGATTTAGATGGAGCAAAGAAGTGGTATCACGAATTATTGGAACATAATCTTGAACCGAATAGGAACACGTTCAACATACTTGTTCCTTTCCTGTGTGACAACGTTGATTATGGGTTTGCATACACCGTGTGCACGAAGAAGTTCAAGGGCCTATGCTCAGTTGATGAAGCTATTTTGCAGAATGTGGTTAATGGGTTGGTGAAGAACTCAATGATCAAAGAAGCTGAAACATTAGTCCAGCTAGGAAGGTCTAACAGTTATTTTCCTTACAATCTTGTCATGCCTAGCACCGTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_325821.p1 GENE.R_Transcript_325821~~R_Transcript_325821.p1 ORF type:complete len:393 (+),score=52.91,PPR_2|PF13041.2|0.00061,PPR_2|PF13041.2|3.5e-07,PPR_2|PF13041.2|1.3e-05,PPR_2|PF13041.2|1.2e-09,PPR_2|PF13041.2|0.00082,PPR_2|PF13041.2|1.2e-12,PPR_2|PF13041.2|5.4e+02,PPR|PF01535.16|1.7e-05,PPR|PF01535.16|0.032,PPR|PF01535.16|6.5e-07,PPR|PF01535.16|7.8e-06,PPR|PF01535.16|2.8,PPR|PF01535.16|3.7e-06,PPR|PF01535.16|15,PPR_1|PF12854.3|0.013,PPR_1|PF12854.3|4.9,PPR_1|PF12854.3|4.5e-08,PPR_1|PF12854.3|9.6e-06,PPR_1|PF12854.3|19,PPR_1|PF12854.3|3.2e-07,PPR_1|PF12854.3|0.35,PPR_1|PF12854.3|7.7e+02,PPR_3|PF13812.2|1.5e+02,PPR_3|PF13812.2|0.25,PPR_3|PF13812.2|0.21,PPR_3|PF13812.2|0.0033,PPR_3|PF13812.2|0.028,PPR_3|PF13812.2|2.3e+02,PPR_3|PF13812.2|0.061,PPR_3|PF13812.2|6.5e+03 R_Transcript_325821:94-1272(+)
MSKTNIYARLNRIFSSTKKTLLPKTLAPPETPEIPTNYTESISDLLNQRDPLKLVQKFNSLSIHPYVRRRHRLYEIIIYRLTRANRLSLIEDTLETQKKYISGQCFASRLITLYGKAGMFDHAHKLFDEMPERKCERGVRSFNALLGAAVDSKKFDKAYELFRELPSKISVKPSVESYGMAVNALCKLGLLDEAISLLDEMEENGLKISIVCFNTIMGSLCRKEDFVEAEKIMDRMIKSGVNPDMCSYICRMQILTSEGKLSNAIELLEQFKGKGIKPNVGLYNVLIQGFCKNDDLDGAKKWYHELLEHNLEPNRNTFNILVPFLCDNVDYGFAYTVCTKKFKGLCSVDEAILQNVVNGLVKNSMIKEAETLVQLGRSNSYFPYNLVMPSTV*

Click here to download the sequence:
Link to NCBI Protein BLAST