Transcript Information: R_Transcript_325871.p1


Annotated TAIR IDAT5G42905.1
Annotated Gene NamePolynucleotidyl transferase, ribonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:17201414-17202323 | Reverse length=258
E-Value3E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.4163904470849
Replicate 27.4543078401058
Replicate 36.5512365906156
Condition 2: 8 Hour
Replicate 13.0426222715512
Replicate 24.6750561640349
Replicate 33.1863774067346
Condition 3: 24 Hour
Replicate 17.0186590143869
Replicate 25.4376871031995
Replicate 35.3963768951916


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_325871.p1 GENE.R_Transcript_325871~~R_Transcript_325871.p1 ORF type:complete len:507 (+),score=40.22,RVT_3|PF13456.2|4.2e-16,zf-RVT|PF13966.2|1.1e-15,zf-RVT|PF13966.2|4.6e+03,zf-RVT|PF13966.2|1.1e+04 R_Transcript_325871:1469-2989(+)
ATGCAGCTTTCTTGGCTAAATTGGGGTGGAGAGTGCTCAATGAGCCGTCGAACCTATGGTCCCGAGTGTTGCGCCACAAATATTGTGACGGGAGAAATGATATTGATATGTTCTCATCCCGACAAGATACATCTCATACTTGGCGTGGTATTTTGCATGGCGCCCCGTTGCTCAGGAAAAGGGGTCATGATGTCTATTGGGGATGGCAACCGCACACTTTTCTGGCTCCACAACTGGGCGGATAACAACCCACTTATTGACATGACGCTAAGTGAACCTTCGGAATCTGATCTTGGACGCACAGTTGCTGAGTACTGGGGAGGCTCTTCTTGGAAGTGGGAGGAATTTTCGCACATGCTGCCAGCCAATGTGCTACAGAAAATTGCCTCACACTTTGTGTCTCCAGAGTCAAATATTTCAGATCATTTCTACTGGAGAGGTTCAAGATCAGGGGACTTCTCAATCAAATCTGCTATGGCAATTCTTCAAGAACAAAGCCCCTCCAACCCAAACCCACTCTGGAAAGATATTTGGAGAATTAAAGGCACTCAACGCATGAGGAACTTTATGTGGCTAGCCCTACATGAAAGTTTTCTCTGCAATGCTACTAGAGTTCGTCGTCACGTCGCTGTCGATGCGTCTTGCCCGCAGTGCCCCGCCCCTATTGAAACCTGCCTTCATGTCTTGAGGGACTGTCCCATGGCCCGTGATCTTTGGAGGCGCTTGCGCCCCCCCTTTACTGATGAAGCATTCTTCTCGGGCAACATACAATCCTGGGTGGCTTCCAACATATCTGCCGCTGAACTGTGGCCCTCGTACTTTACTTTCATTTGCTGGTATCTTTGGAGGTGGAGGAACAACTCCCAGTTCCAACACCCTGAAGACACCCCCTTTGACAAGAAAGTTTTTATTTGCAACCGGGTCTTAGAATACCTGAGTATTGAAGAAAAGAAGACTTCACTGTATGCTTATGGTAAGCGTCAGCGCACTGAAACACTCATCCATTGGGAGTACCCACCTATGGATTGGGTTAAATTAAATACTGATGGTTGTGCCAAGGGTAATCCAGGACCGGCTGGCGCAGGAGGAGTACTTCGTTCTTCAGTGGGTGCTTTCTTGGGGGCTTTTGCAATGAAATGTGGCGTGTGTACTTCAATGAAAGCTGAGCTCTTGGGAATTCTAAGAGGATTGAAAATGGCTCGGGATCTGGGAATCTCGCAACTCATACTGGAAGTGGACTCTGAAGCCTCGGTTCAAACTTTGGGGTGTGATCCGGCTCCACACAATCCTAACTACCACATCATATTGCAATGCAGACTGCTCTTAAACTATGAGGGATGGGACGTTCGAATGAAGCATGTTTACAGAAAGGCAAATAGCTGTGCTGATTGGTTAGCCAATAAAGGACTCGAAGGCTCTCAAGAAGTAGTTGTTTTTAATTATCCTCCTATAGGCTTGCATGAGCTTTTGTATGCTGATTTGATGGGTCTTTCCAAGCCACGAAATGTAGTCATTCCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_325871.p1 GENE.R_Transcript_325871~~R_Transcript_325871.p1 ORF type:complete len:507 (+),score=40.22,RVT_3|PF13456.2|4.2e-16,zf-RVT|PF13966.2|1.1e-15,zf-RVT|PF13966.2|4.6e+03,zf-RVT|PF13966.2|1.1e+04 R_Transcript_325871:1469-2989(+)
MQLSWLNWGGECSMSRRTYGPECCATNIVTGEMILICSHPDKIHLILGVVFCMAPRCSGKGVMMSIGDGNRTLFWLHNWADNNPLIDMTLSEPSESDLGRTVAEYWGGSSWKWEEFSHMLPANVLQKIASHFVSPESNISDHFYWRGSRSGDFSIKSAMAILQEQSPSNPNPLWKDIWRIKGTQRMRNFMWLALHESFLCNATRVRRHVAVDASCPQCPAPIETCLHVLRDCPMARDLWRRLRPPFTDEAFFSGNIQSWVASNISAAELWPSYFTFICWYLWRWRNNSQFQHPEDTPFDKKVFICNRVLEYLSIEEKKTSLYAYGKRQRTETLIHWEYPPMDWVKLNTDGCAKGNPGPAGAGGVLRSSVGAFLGAFAMKCGVCTSMKAELLGILRGLKMARDLGISQLILEVDSEASVQTLGCDPAPHNPNYHIILQCRLLLNYEGWDVRMKHVYRKANSCADWLANKGLEGSQEVVVFNYPPIGLHELLYADLMGLSKPRNVVIP*

Click here to download the sequence:
Link to NCBI Protein BLAST