Transcript Information: R_Transcript_325871.p2


Annotated TAIR IDAT4G20520.1
Annotated Gene NameRNA binding;RNA-directed DNA polymerases
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:11045912-11047716 | Forward length=376
E-Value1E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.88756469758675
Replicate 20.48828605619298
Replicate 30.33900034497477
Condition 2: 8 Hour
Replicate 10.41413725069336
Replicate 20.66184428282579
Replicate 30.92101195536847
Condition 3: 24 Hour
Replicate 11.8443904326697
Replicate 21.1657113578529
Replicate 31.6195975983962


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_325871.p2 GENE.R_Transcript_325871~~R_Transcript_325871.p2 ORF type:5prime_partial len:473 (+),score=38.93,RVT_1|PF00078.23|2.1e-46 R_Transcript_325871:3-1421(+)
GCTCTTGGTGTATGGGTCTGGGAACCTAATGCTCTTCAAGATATGGTCGTGGACTATTTCCAACTTTTATACAAGGAAGAGTCCCAACATGCGGGGCCTACCAGTCTGCCACGTAGTGCTTTTCCTAGCCTGCCCATCCACGACTATAACTCTCTGGCAAGGCCCTTCACTCATGATGAAGTCCAAACGTCAATTTTCAGCATGAGCCCACTGAAGGCCCCGGGACCAGACGGCTTCCAAGCACTCTTCTTCCAAAAGAACTGGGGTCTAGTAGGTGAGAGCGTCACTCGTTTGGTTCTGGGGGTTCTGAATGGGGCTACAACCCCAGAAGGCTTTAATGAAACTCTTCTTGTTCTTATTCCCAAGGTTGATAACCCAGAGAAAGTCACACAACTCCGTCCCATAAGCCTCTGCAACGTTATCTTCAAGGCGGCGACGAAGGCCATCGTTCATAGACTTAAACCACTGCTGCCCAACATGATATCTCCTTTCCAGTCAAGTTTTGTCCCTGATCGACAAATCTCGGACAATGTGGTGATAGTTCAGGAGCTCCTCCATACAATACGAACCAAAGGTAGAAATAAAGCACTGATGGCTGTCAAGATTGACCTTGAGAAGGCTTATGATCGCATTCGGTGGTCTTTCATTCGTGAGACTTTGACGGAGGTGGGCTTTCCTCAACACCTCGTTGAAGTTGTCATGAATTGTATATCTTCATGCAAAATGAAAGTAATGTGGAATGGCATCATGACGGACTCCTTTTGCCCTTCTAGAGGAGTACGCCAAGGTGACCCACTTTCACCATATATTTTTGTGCTTGCCATGGAACGGCTCTCGCACTTAATCAATGAAGCAGTCTCATCAGGTATTTGGGTCCCTTTGGAAACAAGCCCCGGAGGCCCTAAAATATCTCATATCTTCTATGCTGATGATCTAATTCTTTTTGGTGAAGCCACTGTCCATCAAGCCACCACTGTGGCCCAGTGTCTTTCTCGGTTTTGCGAAGCCTCAGGCCAGAAAGTTAGCTACAGCAAGTCCCAGCTGCTTCTCTCCAAAGCGGTTCAACCACGCCTCGCAAATACTTTAAGTGATACGCTTAATATTCCGATTGCGGAGAACTTTGGCAAATATCTAGGAATACCTGCTATTCATGGGCGGGTAACAAGGTCGAGTTTTCAGCATATCTTAGATAAAGTCAATGCAAGACTCTCCGGATGGAAGGCGCGGTGCCTTTCTATGGCGGGACGTGCTACCCTGACACAATCCGCCTTGTCCTGTGTGCCTTATTACTCAATGCAAACCAACCCGCTCCCTCGATCGGTATGTGATGAAATCGATAAAAAAATGTCGAGGCTTTGTATGGGGGAGCACAGAGCAACGAAGGAAAATTCACCTCGTCAACTGGGAAAATGTCTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_325871.p2 GENE.R_Transcript_325871~~R_Transcript_325871.p2 ORF type:5prime_partial len:473 (+),score=38.93,RVT_1|PF00078.23|2.1e-46 R_Transcript_325871:3-1421(+)
ALGVWVWEPNALQDMVVDYFQLLYKEESQHAGPTSLPRSAFPSLPIHDYNSLARPFTHDEVQTSIFSMSPLKAPGPDGFQALFFQKNWGLVGESVTRLVLGVLNGATTPEGFNETLLVLIPKVDNPEKVTQLRPISLCNVIFKAATKAIVHRLKPLLPNMISPFQSSFVPDRQISDNVVIVQELLHTIRTKGRNKALMAVKIDLEKAYDRIRWSFIRETLTEVGFPQHLVEVVMNCISSCKMKVMWNGIMTDSFCPSRGVRQGDPLSPYIFVLAMERLSHLINEAVSSGIWVPLETSPGGPKISHIFYADDLILFGEATVHQATTVAQCLSRFCEASGQKVSYSKSQLLLSKAVQPRLANTLSDTLNIPIAENFGKYLGIPAIHGRVTRSSFQHILDKVNARLSGWKARCLSMAGRATLTQSALSCVPYYSMQTNPLPRSVCDEIDKKMSRLCMGEHRATKENSPRQLGKCL*

Click here to download the sequence:
Link to NCBI Protein BLAST