Transcript Information: R_Transcript_325872.p1


Annotated TAIR IDAT4G29090.1
Annotated Gene NameRibonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:14333528-14335255 | Forward length=575
E-Value6E-42
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.4049866001157
Replicate 20.68489461092919
Replicate 33.1990041291263
Condition 2: 8 Hour
Replicate 12.1715293072481
Replicate 21.3220500986634
Replicate 33.5711119773034
Condition 3: 24 Hour
Replicate 15.5229791088055
Replicate 23.6646352692804
Replicate 34.1945856076827


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_325872.p1 GENE.R_Transcript_325872~~R_Transcript_325872.p1 ORF type:complete len:981 (+),score=75.34,RVT_1|PF00078.23|1e-45,RVT_3|PF13456.2|1.1e-15,zf-RVT|PF13966.2|2.8e-15,zf-RVT|PF13966.2|1.2e+04 R_Transcript_325872:1792-4734(+)
ATGGTCGTGGACTATTTCCAACTTTTATACAAGGAAGAGTCCCAACATGCGGGGCCTACCAGTCTGCCACGTAGTGCTTTTCCTAGCCTGCCCATCCACGACTATAACTCTCTGGCAAGGCCCTTCACTCATGATGAAGTCCAAACGTCAATTTTCAGCATGAGCCCACTGAAGGCCCCGGGACCAGACGGCTTCCAAGCACTCTTCTTCCAAAAGAACTGGGGTCTAGTAGGTGAGAGCGTCACTCGTTTGGTTCTGGGGGTTCTGAATGGGGCTACAACCCCAGAAGGCTTTAATGAAACTCTTCTTGTTCTTATTCCCAAGGTTGATAACCCAGAGAAAGTCACACAACTCCGTCCCATAAGCCTCTGCAACGTTATCTTCAAGGCGGCGACGAAGGCCATCGTTCATAGACTTAAACCACTGCTGCCCAACATGATATCTCCTTTCCAGTCAAGTTTTGTCCCTGATCGACAAATCTCGGACAATGTGGTGATAGTTCAGGAGCTCCTCCATACAATACGAACCAAAGGTAGAAATAAAGCACTGATGGCTGTCAAGATTGACCTTGAGAAGGCTTATGATCGCATTCGGTGGTCTTTCATTCGTGAGACTTTGACGGAGGTGGGCTTTCCTCAACACCTCGTTGAAGTTGTCATGAATTGTATATCTTCATGCAAAATGAAAGTAATGTGGAATGGCATCATGACGGACTCCTTTTGCCCTTCTAGAGGAGTACGCCAAGGTGACCCACTTTCACCATATATTTTTGTGCTTGCCATGGAACGGCTCTCGCACTTAATCAATGAAGCAGTCTCATCAGGTATTTGGGTCCCTTTGGAAACAAGCCCCGGAGGCCCTAAAATATCTCATATCTTCTATGCTGATGATCTAATTCTTTTTGGTGAAGCCACTGTCCATCAAGCCACCACTGTGGCCCAGTGTCTTTCTCGGTTTTGCGAAGCCTCAGGCCAGAAAGTTAGCTACAGCAAGTCCCAGCTGCTTCTCTCCAAAGCGGTTCAACCACGCCTCGCAAATACTTTAAGTGATACGCTTAATATTCCGATTGCGGAGAACTTTGGCAAATATCTAGGAATACCTGCTATTCATGGGCGGGTAACAAGGTCGAGTTTTCAGCATATCTTAGATAAAGTCAATGCAAGACTCTCCGGATGGAAGGCGCGGTGCCTTTCTATGGCGGGACGTGCTACCCTGACACAATCCGCCTTGTCCTGTGTGCCTTATTACTCAATGCAAACCAACCCGCTCCCTCGATCGGTATGTGATGAAATCGATAAAAAATGTCGAGGCTTTGTATGGGGGAGCACAGAGCAACGAAGGAAAATTCACCTCGTCAACTGGGAAAATGTCTCTAAGCCGAAGCATGAGGGTGGACTAGGTATCCGCTCAACCCGACAAGCCAATGCAGCTTTCTTGGCTAAATTGGGGTGGAGAGTGCTCAATGAGCCGTCGAACCTATGGTCCCGAGTGTTGCGCCACAAATATTGTGACGGGAGAAATGATATTGATATGTTCTCATCCCGACAAGATACATCTCATACTTGGCGTGGTATTTTGCATGGCGCCCCGTTGCTCAGGAAAGGGGTCATGATGTCTATTGGGGATGGCAACCGCACACTTTTCTGGCTCCACAACTGGGCGGATAACAACCCACTTATTGACATGACGCTAAGTGAACCTTCGGAATCTGATCTTGGACGCACAGTTGCTGAGTACTGGGGAGGCTCTTCTTGGAAGTGGGAGGAATTTTCGCACATGCTGCCAGCCAATGTGCTACAGAAAATTGCCTCACACTTTGTGTCTCCAGAGTCAAATATTTCAGATCATTTCTACTGGAGAGGTTCAAGATCAGGGGACTTCTCAATCAAATCTGCTATGGCAATTCTTCAAGAACAAAGCCCCTCCAACCCAAACCCACTCTGGAAAGATATTTGGAGAATTAAAGGCACTCAACGCATGAGGAACTTTATGTGGCTAGCCCTACATGAAAGTTTTCTCTGCAATGCTACTAGAGTTCGTCGTCACGTCGCTGTCGATGCGTCTTGCCCGCAGTGCCCCGCCCCTATTGAAACCTGCCTTCATGTCTTGAGGGACTGTCCCATGGCCCGTGATCTTTGGAGGCGCTTGCGCCCCCCCTTTACTGATGAAGCATTCTTCTCGGGCAACATACAATCCTGGGTGGCTTCCAACATATCTGCCGCTGAACTGTGGCCCTCGTACTTTACTTTCATTTGCTGGTATCTTTGGAGGTGGAGGAACAACTCCCAGTTCCAACACCCTGAAGACACCCCCTTTGACAAGAAAGTTTTTATTTGCAACCGGGTCTTAGAATACCTGAGTATTGAAGAAAAGAAGACTTCACTGTATGCTTATGGTAAGCGTCAGCGCACTGAAACACTCATCCATTGGGAGTACCCACCTATGGATTGGGTTAAATTAAATACTGATGGTTGTGCCAAGGGTAATCCAGGACCGGCTGGCGCAGGAGGAGTACTTCGTTCTTCAGTGGGTGCTTTCTTGGGGGCTTTTGCAATGAAATGTGGCGTGTGTACTTCAATGAAAGCTGAGCTCTTGGGAATTCTAAGAGGATTGAAAATGGCTCGGGATCTGGGAATCTCGCAACTCATACTGGAAGTGGACTCTGAAGCCTCGGTTCAAACTTTGGGGTGTGATCCGGCTCCACACAATCCTAACTACCACATCATATTGCAATGCAGACTGCTCTTAAACTATGAGGGATGGGACGTTCGAATGAAGCATGTTTACAGAAAGGCAAATAGCTGTGCTGATTGGTTAGCCAATAAAGGACTCGAAGGCTCTCAAGAAGTAGTTGTTTTTAATTATCCTCCTATAGGCTTGCATGAGCTTTTGTATGCTGATTTGATGGGTCTTTCCAAGCCACGAAATGTAGTCATTCCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_325872.p1 GENE.R_Transcript_325872~~R_Transcript_325872.p1 ORF type:complete len:981 (+),score=75.34,RVT_1|PF00078.23|1e-45,RVT_3|PF13456.2|1.1e-15,zf-RVT|PF13966.2|2.8e-15,zf-RVT|PF13966.2|1.2e+04 R_Transcript_325872:1792-4734(+)
MVVDYFQLLYKEESQHAGPTSLPRSAFPSLPIHDYNSLARPFTHDEVQTSIFSMSPLKAPGPDGFQALFFQKNWGLVGESVTRLVLGVLNGATTPEGFNETLLVLIPKVDNPEKVTQLRPISLCNVIFKAATKAIVHRLKPLLPNMISPFQSSFVPDRQISDNVVIVQELLHTIRTKGRNKALMAVKIDLEKAYDRIRWSFIRETLTEVGFPQHLVEVVMNCISSCKMKVMWNGIMTDSFCPSRGVRQGDPLSPYIFVLAMERLSHLINEAVSSGIWVPLETSPGGPKISHIFYADDLILFGEATVHQATTVAQCLSRFCEASGQKVSYSKSQLLLSKAVQPRLANTLSDTLNIPIAENFGKYLGIPAIHGRVTRSSFQHILDKVNARLSGWKARCLSMAGRATLTQSALSCVPYYSMQTNPLPRSVCDEIDKKCRGFVWGSTEQRRKIHLVNWENVSKPKHEGGLGIRSTRQANAAFLAKLGWRVLNEPSNLWSRVLRHKYCDGRNDIDMFSSRQDTSHTWRGILHGAPLLRKGVMMSIGDGNRTLFWLHNWADNNPLIDMTLSEPSESDLGRTVAEYWGGSSWKWEEFSHMLPANVLQKIASHFVSPESNISDHFYWRGSRSGDFSIKSAMAILQEQSPSNPNPLWKDIWRIKGTQRMRNFMWLALHESFLCNATRVRRHVAVDASCPQCPAPIETCLHVLRDCPMARDLWRRLRPPFTDEAFFSGNIQSWVASNISAAELWPSYFTFICWYLWRWRNNSQFQHPEDTPFDKKVFICNRVLEYLSIEEKKTSLYAYGKRQRTETLIHWEYPPMDWVKLNTDGCAKGNPGPAGAGGVLRSSVGAFLGAFAMKCGVCTSMKAELLGILRGLKMARDLGISQLILEVDSEASVQTLGCDPAPHNPNYHIILQCRLLLNYEGWDVRMKHVYRKANSCADWLANKGLEGSQEVVVFNYPPIGLHELLYADLMGLSKPRNVVIP*

Click here to download the sequence:
Link to NCBI Protein BLAST