Transcript Information: R_Transcript_326240.p1


Annotated TAIR IDAT3G23330.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8347200-8349347 | Forward length=715
E-Value1E-129
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.26314884731574
Replicate 20.13759043523131
Replicate 30.09006580968343
Condition 2: 8 Hour
Replicate 10.12836626446787
Replicate 20.20514570496501
Replicate 30.40442644894702
Condition 3: 24 Hour
Replicate 10.33097756160517
Replicate 20.17343584972931
Replicate 30.48766838751934


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_326240.p1 GENE.R_Transcript_326240~~R_Transcript_326240.p1 ORF type:complete len:763 (+),score=117.35,PPR|PF01535.16|0.014,PPR|PF01535.16|8.6e-05,PPR|PF01535.16|1.3e+03,PPR|PF01535.16|1,PPR|PF01535.16|0.00016,PPR|PF01535.16|0.00015,PPR|PF01535.16|0.099,PPR|PF01535.16|3e-07,PPR|PF01535.16|0.081,PPR|PF01535.16|1.8e-06,PPR|PF01535.16|0.032,PPR|PF01535.16|7.4,PPR|PF01535.16|1.5e+02,PPR|PF01535.16|1.4e+04,PPR_2|PF13041.2|0.025,PPR_2|PF13041.2|2.7e-07,PPR_2|PF13041.2|0.98,PPR_2|PF13041.2|0.0081,PPR_2|PF13041.2|4.9e-07,PPR_2|PF13041.2|4.5,PPR_2|PF13041.2|2.6e-06,PPR_2|PF13041.2|24,PPR_2|PF13041.2|5.7e-10,PPR_2|PF13041.2|12,PPR_2|PF13041.2|2.9e+03,PPR_2|PF13041.2|8.3e+02,PPR_3|PF13812.2|0.74,PPR_3|PF13812.2|0.17,PPR_3|PF13812.2|1.5e+03,PPR_3|PF13812.2|27,PPR_3|PF13812.2|0.088,PPR_3|PF13812.2|0.15,PPR_3|PF13812.2|45,PPR_3|PF13812.2|0.28,PPR_3|PF13812.2|2.8e+02,PPR_3|PF13812.2|0.0021,PPR_3|PF13812.2|0.052,PPR_3|PF13812.2|87,PPR_3|PF13812.2|25,DYW_deaminase|PF14432.2|6e-39,PPR_1|PF12854.3|45,PPR_1|PF12854.3|4.1,PPR_1|PF12854.3|5.6e+03,PPR_1|PF12854.3|14,PPR_1|PF12854.3|0.04,PPR_1|PF12854.3|0.00054,PPR_1|PF12854.3|3.9,PPR_1|PF12854.3|8.4e-05,PPR_1|PF12854.3|0.061,PPR_1|PF12854.3|0.04,PPR_1|PF12854.3|4.7,PPR_1|PF12854.3|1.5e+02,PPR_1|PF12854.3|2.9e+03 R_Transcript_326240:212-2500(+)
ATGCTATGGACTTACCCATATACCAAGTTCTTCTATAACTCCACTGTTTTGAAAACCCTTTGCAATCCCACTTTGACCTCAACTACTGCTAAACTTACAAACTCAGCCCAGATTGAGATTACCCAGAAAAAAATACAGCTATTCCATTCTTCTTTCTCCCCACAATTCCAATTTCTGGGTTTTATTGATAATTTGAAGGATGAGGAGACCCTTCAGATGCTTCATGGAAGTGTCATTAAAAAAGGTTCCATCTTTGATTTGGGTGTTGGGAATTATATGCTAAGCTTGTATGTGAAATTCAAGGATTTGGGTTCTGCCCAGAAGCTGTTTGATGAAATGTCTGAGAGAGATGTTCGCACATGGACTATTCTGGTTTCGGGTTTCACTCGAATGCGGTTGTTTCAGCTAGCACTAGATTGTTTCAAACTTATGCTTAGGGAGGGGGTTTGTCCGAATGGGTATACGTTGTCGAGTGTCTTCAAGTGTTGTTCGTTTGCTGGTTTGGTTCGAAATGGTAAGGCGGTTCATGGATGGATGATGACAAGGGGGGTTGGTTTGGATTCTGTCTTGAGGAACTCTATCCTGGACTTTTATGTGAAATGTGGTGAGCTTGATAATGCTAAGAGGTTGTTTCAGTTTACCGATGATGTGGATATGGTTTCGTGGAATATAATGATTGGTGCTTTTATGCAAAGGGGTGATGTGGAGAGTTCTCTTGATTTGTTTAGAAGATTGCCTGTTAAAGATGTTGCTACTTGGAATACAGTAATATCAGGTCTTATGAGAAATGGATCTGAAAGAACTGCATTGGAACTTCTCTACGACATGGTAAAAGGTCAAGCTTGTCTTAATGAATTCACCTTTACTATAGCGCTGGTTTTGGTTTCATCGCTGTCGATACTGGATCTAGGGGTACAGATACATGGTCGATTGATCAGACTCGGATTATATGATAATGTATATATACAATCTTCACTTATTGATATGTATTCCAAATGTGGGGTGGTTGGTAAGGCTTTAGAAGTCTTCAAGCAAGAACAAAGTTCCAAGTTGATGCATGACACTGTTTCTTGGAGTTCCCTGGTTTCTGGATTTTCTCAGAATGGTAGGTGGGAAGAAGCTATAGAAATGCTCTGCATAATGGTTCATGAAGGAATTAAAGTAGACAAATACATCCTAACTACTATTGTTTCTGTGTGTGCTGATTATGGGATGCTGGTTTTCGGTCAGCAGATCCATGCTCTTATACATAAAAGTGGACACAAAATGGATCTAGTTTTGTGTTCCTCCTTGGTCGATATGTATTCCAAATGTGGCAATTTAGGTGATGCTCAATCAATGTTTGACCAAAGTACTACAAGGAACACTATTCTATGGACAGCGTTAATAACTGGATATGCTTTACATGGCCATGGTAGAGAAGCTGTCAGACTTTTTGAGTTAATGATGGAGGAGGGTATTCAGCCAAATGAGGTGACCTTTGTAGCTGTTTTATTGGCATGCAGCCATGCTGGGCTAGTTCATGAAGGCCGCAAATATTTCAAAGACATGAAGGAAGTTTACAATGTTAAGACTGGGCTTGAACATTTCACTTGTATGGTTGATCTCCTTGGCCGGGCTGGCCAGTTGGATGAGATAAAGAACTTCATATACACCAATGAGATATCTCATCTTAGTTCAGTATGGAAGGCCTTCTTATCATCTTGTCGAGTTCACAAAAACTATGTTATGGGAAAGTGGGTATCCCAAAAGCTGCTTGAACTTGAGCCATTGGAAGCAGAACCGTATGTTTTGCTGTCAAACATGTGTGCCACCTCTAACAGATGGGAAGAATCTGCCACAGTTAGGAGTTTGATGCAGAAGAAAGGGGTTAGAAAACACCCTGGTCAATCTTGGATTCAGCTCAACAATCAAGTTCATACTTTCATGATGGGCGATAGGTCTCACTCACAAGAAGCTGAAATCTATACTTATTTGGATAACCTAATTGGTAGGTTGAAAGAGATAGGTTATAGTACTGAAGTAGGGCAGGTTATGCAAGATGTAGAAGAAGAACAGCAGGAAATGTTTCTTCGTTACCATAGTGAGAAGCTTGCTGTTGCTTATGGCATTATTAGGACACCTAGTGGAACACCAATTCGGGTCATGAAGAACCTCCGAGTCTGTCAGGATTGCCATAATTTTCTCAAGTATACTTCTCAGCTTTTAGGCAGGGATATAATCGTTAGAGACATCCGTAGATTCCACTTTTTCAAGGATGGGCTCTGTTCTTGTGGAGATTACTGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_326240.p1 GENE.R_Transcript_326240~~R_Transcript_326240.p1 ORF type:complete len:763 (+),score=117.35,PPR|PF01535.16|0.014,PPR|PF01535.16|8.6e-05,PPR|PF01535.16|1.3e+03,PPR|PF01535.16|1,PPR|PF01535.16|0.00016,PPR|PF01535.16|0.00015,PPR|PF01535.16|0.099,PPR|PF01535.16|3e-07,PPR|PF01535.16|0.081,PPR|PF01535.16|1.8e-06,PPR|PF01535.16|0.032,PPR|PF01535.16|7.4,PPR|PF01535.16|1.5e+02,PPR|PF01535.16|1.4e+04,PPR_2|PF13041.2|0.025,PPR_2|PF13041.2|2.7e-07,PPR_2|PF13041.2|0.98,PPR_2|PF13041.2|0.0081,PPR_2|PF13041.2|4.9e-07,PPR_2|PF13041.2|4.5,PPR_2|PF13041.2|2.6e-06,PPR_2|PF13041.2|24,PPR_2|PF13041.2|5.7e-10,PPR_2|PF13041.2|12,PPR_2|PF13041.2|2.9e+03,PPR_2|PF13041.2|8.3e+02,PPR_3|PF13812.2|0.74,PPR_3|PF13812.2|0.17,PPR_3|PF13812.2|1.5e+03,PPR_3|PF13812.2|27,PPR_3|PF13812.2|0.088,PPR_3|PF13812.2|0.15,PPR_3|PF13812.2|45,PPR_3|PF13812.2|0.28,PPR_3|PF13812.2|2.8e+02,PPR_3|PF13812.2|0.0021,PPR_3|PF13812.2|0.052,PPR_3|PF13812.2|87,PPR_3|PF13812.2|25,DYW_deaminase|PF14432.2|6e-39,PPR_1|PF12854.3|45,PPR_1|PF12854.3|4.1,PPR_1|PF12854.3|5.6e+03,PPR_1|PF12854.3|14,PPR_1|PF12854.3|0.04,PPR_1|PF12854.3|0.00054,PPR_1|PF12854.3|3.9,PPR_1|PF12854.3|8.4e-05,PPR_1|PF12854.3|0.061,PPR_1|PF12854.3|0.04,PPR_1|PF12854.3|4.7,PPR_1|PF12854.3|1.5e+02,PPR_1|PF12854.3|2.9e+03 R_Transcript_326240:212-2500(+)
MLWTYPYTKFFYNSTVLKTLCNPTLTSTTAKLTNSAQIEITQKKIQLFHSSFSPQFQFLGFIDNLKDEETLQMLHGSVIKKGSIFDLGVGNYMLSLYVKFKDLGSAQKLFDEMSERDVRTWTILVSGFTRMRLFQLALDCFKLMLREGVCPNGYTLSSVFKCCSFAGLVRNGKAVHGWMMTRGVGLDSVLRNSILDFYVKCGELDNAKRLFQFTDDVDMVSWNIMIGAFMQRGDVESSLDLFRRLPVKDVATWNTVISGLMRNGSERTALELLYDMVKGQACLNEFTFTIALVLVSSLSILDLGVQIHGRLIRLGLYDNVYIQSSLIDMYSKCGVVGKALEVFKQEQSSKLMHDTVSWSSLVSGFSQNGRWEEAIEMLCIMVHEGIKVDKYILTTIVSVCADYGMLVFGQQIHALIHKSGHKMDLVLCSSLVDMYSKCGNLGDAQSMFDQSTTRNTILWTALITGYALHGHGREAVRLFELMMEEGIQPNEVTFVAVLLACSHAGLVHEGRKYFKDMKEVYNVKTGLEHFTCMVDLLGRAGQLDEIKNFIYTNEISHLSSVWKAFLSSCRVHKNYVMGKWVSQKLLELEPLEAEPYVLLSNMCATSNRWEESATVRSLMQKKGVRKHPGQSWIQLNNQVHTFMMGDRSHSQEAEIYTYLDNLIGRLKEIGYSTEVGQVMQDVEEEQQEMFLRYHSEKLAVAYGIIRTPSGTPIRVMKNLRVCQDCHNFLKYTSQLLGRDIIVRDIRRFHFFKDGLCSCGDYW*

Click here to download the sequence:
Link to NCBI Protein BLAST