Transcript Information: R_Transcript_32689.p1


Annotated TAIR IDAT3G06770.2
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:2135119-2137033 | Reverse length=446
E-Value4.8E-194
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.011369258525
Replicate 212.524109020248
Replicate 316.074903576247
Condition 2: 8 Hour
Replicate 17.9471666934041
Replicate 28.777626863097
Replicate 39.3544484556819
Condition 3: 24 Hour
Replicate 112.53617105197
Replicate 212.430266523856
Replicate 315.407792115119


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_32689.p1 GENE.R_Transcript_32689~~R_Transcript_32689.p1 ORF type:complete len:456 (+),score=49.90,Glyco_hydro_28|PF00295.13|1.1e-25,Pectate_lyase_3|PF12708.3|8.9e-15,Pectate_lyase_3|PF12708.3|2.9e+02 R_Transcript_32689:446-1813(+)
ATGCTAGTGGCATTGCTTCTGCTTTTTTCATTGGGCAATGCTATTGAAGTCCTTGCTGAAGACAGTGATGAGCAATGTAGATACAAACCAAAATTGGACCCAAGACCTCATAGTGTATCTATATTGGAGTTTGGTGCTGTTGGGGATGGGAAAACAGTGAACACTGGTGCCTTTCAAAATGCCATTTTCTATCTCAATTCATTTGCAGACAAGGGTGGCGCCCAATTGTATGTGCCGCCAGGGAAGTGGCTCACTGGTAGCTTCAACCTTACTAGCCATCTCACCCTTTTCCTCGAAAAGGATGCTATTATCCTCGGATCTCAGGATCCATCGCATTGGGGAATAGTTGATCCATTGCCATCATATGGTCGCGGAACTGAGCTTCCTGGTAGTAGATATCGGAGCTTGATAAATGGATATAATTTGCACGATGTGGTAATAACAGGTAATGATGGAACTATTGATGGGCAAGGGTCGTTCTGGTGGGATGGTTTTCTCTCGCATACCCTGAACTACAGCCGCCCTCATCTTGTGGAATTTGTAGAGTCAAATGGTGTTGTAGTTTCAAACTTGACTTTTTTGAATGCGCCTGCATATAACATCCATCCCGTCTATTGCAGCCATGTACTAGTGCAAAACATTTCAGTTTGTGCTCCACCCTCATCTCCTTACACAGTTGGTATAGTCCCAGATTCAACGAATCACATATGCATCGAGAGCTGCAACATAAGCACGGGTTTTGATGCCATTGTGCTCAAAAGTGGCTGGGACGAGCATGGCATTGCCTACGGTAGGCCCACGTCCTACGTTCATATCAGAGAGGTGAAGCTTCAGGCGTCAGCTGGCTCTGCCGTGGCATTTGGAAGCCAGATGTCGGGTGGCATTTCTCATGTGCTAGCCGAGAACTTCCACATAAACAACTCCCTCATCGGCATTGACTTCAGAACCGCCCCAGGCAGGGGCGGCTACATTGAGGACATAACCATATCAAATGTGGGGATAGAGAATGTCCAAACCGCATTCAATGCTAGTGGTCAATGGACATCTCATCCAGACGATAAATATGACCCCAGTGCACTCCCAGTTCTAAAATGGATCACATTGGATAATGTCATCGGAATGAATGTAACCGTAGCTGGTAGCTTCACTGGCATCGAAAACTCCCCCTTTGAATTCTCACTATCAAACATCTCAATCTCTCTCAATTCAGCATCCTCCACCACCTGGGTATGTTCTAATGTTTTAGGGTCCTCGAAAAATGTCTCTCCTGAGCCTTGCCCTGAGTTTGAGACCTCCCTTTCAAAATCTTCCTCTATATCTACCACTATTGGCCTAGGTTCCAAAGGTGGTTTGGTCACAGATTTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_32689.p1 GENE.R_Transcript_32689~~R_Transcript_32689.p1 ORF type:complete len:456 (+),score=49.90,Glyco_hydro_28|PF00295.13|1.1e-25,Pectate_lyase_3|PF12708.3|8.9e-15,Pectate_lyase_3|PF12708.3|2.9e+02 R_Transcript_32689:446-1813(+)
MLVALLLLFSLGNAIEVLAEDSDEQCRYKPKLDPRPHSVSILEFGAVGDGKTVNTGAFQNAIFYLNSFADKGGAQLYVPPGKWLTGSFNLTSHLTLFLEKDAIILGSQDPSHWGIVDPLPSYGRGTELPGSRYRSLINGYNLHDVVITGNDGTIDGQGSFWWDGFLSHTLNYSRPHLVEFVESNGVVVSNLTFLNAPAYNIHPVYCSHVLVQNISVCAPPSSPYTVGIVPDSTNHICIESCNISTGFDAIVLKSGWDEHGIAYGRPTSYVHIREVKLQASAGSAVAFGSQMSGGISHVLAENFHINNSLIGIDFRTAPGRGGYIEDITISNVGIENVQTAFNASGQWTSHPDDKYDPSALPVLKWITLDNVIGMNVTVAGSFTGIENSPFEFSLSNISISLNSASSTTWVCSNVLGSSKNVSPEPCPEFETSLSKSSSISTTIGLGSKGGLVTDL*

Click here to download the sequence:
Link to NCBI Protein BLAST