Transcript Information: R_Transcript_327427.p1


Annotated TAIR IDAT3G58050.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G41960.1); Has 13384 Blast hits to 8116 proteins in 546 species: Archae - 41; Bacteria - 766; Metazoa - 5596; Fungi - 1431; Plants - 589; Viruses - 46; Other Eukaryotes - 4915 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:21492539-21497018 | Forward length=1209
E-Value5.3E-35
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1589181558552
Replicate 21.1664611342388
Replicate 32.3633935615078
Condition 2: 8 Hour
Replicate 10.97166130743037
Replicate 22.8394770591982
Replicate 31.1524832139928
Condition 3: 24 Hour
Replicate 10.72881927706997
Replicate 20.87520868613402
Replicate 31.389695535676


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_327427.p1 GENE.R_Transcript_327427~~R_Transcript_327427.p1 ORF type:5prime_partial len:126 (+),score=25.46 R_Transcript_327427:1-378(+)
CCGATCTTGACACTATCCATGCTGATTGACATCAAACCTTCATTGATTCTGTTGGCACATATCATCACTTTGAATGGGCTGTGGGGTCAGCAGAAGAAAAATCTGACATTGTGGAGTGTGAAAAATGTTGGAATGAATGGAAGTGTTCAAGTAAATGGCTTGGATCCTGGTGGTCTAAGTGCATGCTTTATCACCTTGAGAGCATGGAAATTAGATGGTAGATGCACTGAGTTTTCAGTGAAAGCTCATGCATTAAAGGGAAGACAATGTGTGCATTGCAGGCTTGTAGTTGGAAATGGTTATGTAACAATTACGTATGGGGAATATATAGAAAGATTTTTTGAGCATGCAGAAGAGGTATTGTTCTTCTATCAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_327427.p1 GENE.R_Transcript_327427~~R_Transcript_327427.p1 ORF type:5prime_partial len:126 (+),score=25.46 R_Transcript_327427:1-378(+)
PILTLSMLIDIKPSLILLAHIITLNGLWGQQKKNLTLWSVKNVGMNGSVQVNGLDPGGLSACFITLRAWKLDGRCTEFSVKAHALKGRQCVHCRLVVGNGYVTITYGEYIERFFEHAEEVLFFYQ*

Click here to download the sequence:
Link to NCBI Protein BLAST