Transcript Information: R_Transcript_327478.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value2E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.639961224512
Replicate 25.4215799197014
Replicate 38.8723279421717
Condition 2: 8 Hour
Replicate 17.7596050889157
Replicate 28.92335660329
Replicate 311.888026673915
Condition 3: 24 Hour
Replicate 111.963927710212
Replicate 29.3191234748918
Replicate 314.026627651462


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_327478.p1 GENE.R_Transcript_327478~~R_Transcript_327478.p1 ORF type:complete len:426 (+),score=68.99,RVT_1|PF00078.23|2.1e-32 R_Transcript_327478:832-2109(+)
ATGGTGATGTCTCAGATGATTGGAAGGGAACAAGCGGCTTTCGTAAAAGGTAGATTGTTGTATGAAAATATGCTGCTTGCTCATGAGTTATCACAGCATTATAATAGAGCTCACATTTCTCCTCGAGTTCTCATGCAACTTGATATTCAAAAAGCGTATGATACAGTTAGATGGGATTTTATTAAATCTGCCCTGGATTCTTTTGGGTTCCCTGGTGCCTTCAGTTCGAAAATTTTAGCTTGCATCACTTCCTCTAGATTTTCTATCAGCATTGATGGATGGCATAAGGGCTACTTTGAGGGTAAGTGTGGGTTGAGGCAAAGTGATCCTCTCTCCCCTTATTTTTTTGTTATTTGCATAGAGGCATTATCCAGGATGCTCAGGAAACTTGGACGTTGTAAGGAGTTCTCCTACCACCCCAAATGGTTGGGTATCACCTATCTTGCCTTTGATGATGACCTGTTGATTTTCACAAGGGGTGATATTCCTTCTATTAAAGCTGCAATTGACTGTGTAGGGAAGTTTTTGGATATGTCAGGGCTTTACATCAATTCTCAGAAGACTAGCATATTTTTTGGTGGTGTTAAGCAGCAGATTAAGGAGGCGATTCTCAAGAATACTGGTTTTGGAGAGGGGAGATTACCAGTAAGGTATCTAGGCCTACCCTTAAGCTCAGCTGGCATTAAAGCTCATATGTGCAGGGAGTTAATAAATAAAAGTCAGCTGAAACTAAGCCATTGGTCTGCTCAATCTTTACCTTATGCTAGCAAGATGGAATTGATCAATTCTGTGCTATTTGGGATTGAGACTTTTTGGTGCAGTGTTTTTCTCCTTCCCAAAGGTGTTATTGAGAAAATTGAACAACTGTGTAGGAATTTTGTTTGGGGTGTACCTGAGAATGGGAGAAGGATGATTTTCTTTGCATGGCAAAAAGTGTGTCGAGATAAGCATGGGGGCTTTCATATCAGGGAGATACTGAGTTGGAATAAAAGCTTACTCATTAGATGGCTAGCAAAGCTTGCTGGTCATAGTGATTCTTTGTGTGCTGAGTGGTGTGGCAGATATTATCTGAAAGGTGATACAATCTGGATAATTAAAGCTAAGGAGATGGATTCCTGGGCCTGGAAATGTCTGCTGAAGGTTAGGGAAGATCTGAACCAGCTGGCAGGTGACTTACAACAAGCAGTTAGGCTGATCATGGAATGGGAAGCTAGTAACACCTCCTTAACCAAATGTGCCTATCTCAAGATCAGGGGTGAAGCTAGGAAGTTGAAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_327478.p1 GENE.R_Transcript_327478~~R_Transcript_327478.p1 ORF type:complete len:426 (+),score=68.99,RVT_1|PF00078.23|2.1e-32 R_Transcript_327478:832-2109(+)
MVMSQMIGREQAAFVKGRLLYENMLLAHELSQHYNRAHISPRVLMQLDIQKAYDTVRWDFIKSALDSFGFPGAFSSKILACITSSRFSISIDGWHKGYFEGKCGLRQSDPLSPYFFVICIEALSRMLRKLGRCKEFSYHPKWLGITYLAFDDDLLIFTRGDIPSIKAAIDCVGKFLDMSGLYINSQKTSIFFGGVKQQIKEAILKNTGFGEGRLPVRYLGLPLSSAGIKAHMCRELINKSQLKLSHWSAQSLPYASKMELINSVLFGIETFWCSVFLLPKGVIEKIEQLCRNFVWGVPENGRRMIFFAWQKVCRDKHGGFHIREILSWNKSLLIRWLAKLAGHSDSLCAEWCGRYYLKGDTIWIIKAKEMDSWAWKCLLKVREDLNQLAGDLQQAVRLIMEWEASNTSLTKCAYLKIRGEARKLK*

Click here to download the sequence:
Link to NCBI Protein BLAST