Transcript Information: R_Transcript_327546.p1


Annotated TAIR IDAT5G55590.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)QRT1
Annotation TypeOrtholog
Chromosome Positionchr5:22519911-22521699 | Forward length=380
E-Value7E-147
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.27656001446544
Replicate 20.25450061110664
Replicate 30.27765742540791
Condition 2: 8 Hour
Replicate 10.14839918149846
Replicate 20.067760248003593
Replicate 30.2750244033392
Condition 3: 24 Hour
Replicate 10.2782764512449
Replicate 20.13366823570047
Replicate 30.79591653406899


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_327546.p1 GENE.R_Transcript_327546~~R_Transcript_327546.p1 ORF type:5prime_partial len:330 (+),score=49.64,Pectinesterase|PF01095.15|1e-63 R_Transcript_327546:2-991(+)
TGGGATGATATGAAGGTGGATTTACCAAGAGATTCAGTGTCAAAAACTGAGATTAAAGGGAAGCAAAATTGGACTAGTGATGGGATAATTGTGGTTGATCAGACTGGTAAAACAGGGCACTCTGTTTCTGTTCAAGGTGCTGTTGATTTAATTCCTGATGGTAATTCTCAGAGAGTCAAAATCTTCATTCTTCCTGGAATTTACAGGGAAAAGGTGGTTGTACCAACATCCAAGCCTTATATTTCTTTCATTGGGAAGAAAAACCAGGCTTCCAATACTGTAATAACTTGGAACAACAAGGCTTCTGATAGGAACAGCAATGGAGCTGAGCTTGGAACTTTTGGATCTGCTACTATCAGCATTTTTTCCGATTATTTCTGTGCATCTGAGATCACTTTTGAGAACACAGTAGTTGCAGTACCAGGTTGCTATGGCATGCAAGCAGTGGCTTTAAGAGTATCATCTGACAAGGCAATGTTCTACAAAGTTAACGTTCTCGGTGCTCAGGATACTTTGTTGGATGAATCTGGGTCACACTATTTTTACGAGTGCTTCATTCAAGGATCGATTGATTTCATTTTCGGGAATGCAAAATCTTTATATCAGAACACTCTGCTTCATTCGATAGCCAATCGATCAGGAGCAATTGCAGCACATCATCGGAATACACCTGAAGAAGATACCGGGTTCTCGTTCCTGAACTGTACGATCGATGGAAGCGGAATGATCTACTTGGGGAGAGCGTGGGGGGCATACTCGAGAATAATATATTCATACTGTAACATTGATGATATTATACTACCAGCAGGATGGACTGACTGGAACCACACAGACAGACAGAAAACTGCAGTGTTCGGGGAATTCCGCTGTAGAGGCAAAGGAGCAAACACAGGAGGAAGAGTGTTGTGGGCGAAGTCATTCGGCATTCAAGATGCAAGACCATTTCTGGATAAGAAGTTCATTGATGGCCATAAATGGTTGAGACTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_327546.p1 GENE.R_Transcript_327546~~R_Transcript_327546.p1 ORF type:5prime_partial len:330 (+),score=49.64,Pectinesterase|PF01095.15|1e-63 R_Transcript_327546:2-991(+)
WDDMKVDLPRDSVSKTEIKGKQNWTSDGIIVVDQTGKTGHSVSVQGAVDLIPDGNSQRVKIFILPGIYREKVVVPTSKPYISFIGKKNQASNTVITWNNKASDRNSNGAELGTFGSATISIFSDYFCASEITFENTVVAVPGCYGMQAVALRVSSDKAMFYKVNVLGAQDTLLDESGSHYFYECFIQGSIDFIFGNAKSLYQNTLLHSIANRSGAIAAHHRNTPEEDTGFSFLNCTIDGSGMIYLGRAWGAYSRIIYSYCNIDDIILPAGWTDWNHTDRQKTAVFGEFRCRGKGANTGGRVLWAKSFGIQDARPFLDKKFIDGHKWLRL*

Click here to download the sequence:
Link to NCBI Protein BLAST