Transcript Information: R_Transcript_327638.p1


Annotated TAIR IDAT5G52020.1
Annotated Gene NameIntegrase-type DNA-binding superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21124192-21124890 | Reverse length=232
E-Value1.4E-58
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.68734999411075
Replicate 20.17570125871379
Replicate 30.76675272288376
Condition 2: 8 Hour
Replicate 10.5122565888545
Replicate 21.3098424509481
Replicate 33.1138746252547
Condition 3: 24 Hour
Replicate 10.86451993744492
Replicate 20.18456283590441
Replicate 31.1905446064003


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_327638.p1 GENE.R_Transcript_327638~~R_Transcript_327638.p1 ORF type:complete len:239 (+),score=45.52,AP2|PF00847.16|2.8e-09 R_Transcript_327638:413-1129(+)
ATGGGTGATAGAAATGAGTCTAGCTCCGATGTCAATCCACAAGACCAACAAAGTAAATCCCCACAACCAACTCAATTGCCACTCACTATATCAGTCCCATCTGTTGAGGAACCAGCTCAACAACCAGTGGTAGCAACGGCGAAGCGCCCAGCCTCCGCCACGGCCTCCCCTTCGTCCACTACCTCGTCATCGACGGGGTCTCCCACAGGGCGGCACCCCATGTACCGAGGAATCCGGACCCGAGGTGGGAAGTGGGTCTCGGAGATCCGGGAGCCCCGGAAGACAACCCGTATATGGCTTGGTACTTACCCTACCCCTGAGATGGCTGCGGCTGCCTATGACGTGGCAGCATTAGCCCTCAAGGGTAGCGAGGCTATGGTCAATTTCCCTGAGGATGTTATTAGATACCCAGTTCCGGCATCATCCTCGCCTGCTGATATCAGAAAAGCGGCGGCCGCAGCCGCCACTTTGAGGCAGGCGAGAGACCAGAAGACCGAAAATGATGATGACAATTGCTTGTTGAGGCTTGACAAGGTTGGCAATGAAGAAGCTCCTCAAGAGGAATTTGTTGATCTTGAGGCATTCTTTGACATGCCCAACTTGCTTGTTGATATGGCTGGGGCTATGATGGTGAGCCCTCCTAGGTTGACCATCTCCCACCAAAACGATGACTCCCCAGACGAGGGCGATGGTGGTAGCTTGTGGAGCTACGACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_327638.p1 GENE.R_Transcript_327638~~R_Transcript_327638.p1 ORF type:complete len:239 (+),score=45.52,AP2|PF00847.16|2.8e-09 R_Transcript_327638:413-1129(+)
MGDRNESSSDVNPQDQQSKSPQPTQLPLTISVPSVEEPAQQPVVATAKRPASATASPSSTTSSSTGSPTGRHPMYRGIRTRGGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGSEAMVNFPEDVIRYPVPASSSPADIRKAAAAAATLRQARDQKTENDDDNCLLRLDKVGNEEAPQEEFVDLEAFFDMPNLLVDMAGAMMVSPPRLTISHQNDDSPDEGDGGSLWSYD*

Click here to download the sequence:
Link to NCBI Protein BLAST