Transcript Information: R_Transcript_327747.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value2E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.12675667329666
Replicate 20.21871146266977
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.07764195083745
Replicate 30.44118498035663
Condition 3: 24 Hour
Replicate 10.079714608429528
Replicate 20
Replicate 30.075998974607282


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_327747.p1 GENE.R_Transcript_327747~~R_Transcript_327747.p1 ORF type:5prime_partial len:288 (+),score=36.13,RVT_1|PF00078.23|3.8e-37,RVT_1|PF00078.23|1.5e+03 R_Transcript_327747:3-866(+)
GCTTTCTTACCTGTGCGATCCATTACTCATAACATTTTGCTCACACATAACTTGGTGCATGCTTATAGTAGGAAGAACATGTCACCTAGAGCAATGATAAAAATAGATATCCAAAAAGCATATGATACTGTTTCATGGAAATTCTTGAAGCAAGTCCTACTTTATTTTGGATTCCCAGTGGAGATGGTGGATAGAATCATGACTTGTGTGAGTACATCTCAATTCTCTGTGAATGTGAATGGGGGGCTGCATGGTTTTTTCAAAGGAAGGTGTGGACTAAGACAAGGGGATCCTATGTCTCCATACTTGTTCGTTTTATGTATGGAAATACTTTCTAGGATGCTGAGAATGTGTTTCACAGAAAAGGGGTTCAAAGCTCATCCCAGGTGTGGGAGAAATAAACTGAATCATGTGATTTTTGCTGATGACATGTTGCTATTCTCTAAAGGGGATAAGGAATCAGTGGATGTGTTACAAAAGACATTCAATAAATTCTCAAGGATGTCAGGATTATTTGCAAATAAGGATAAGAGCTGTATGTACTTTTGTGGAGTACAGGAAACAGAAAAGGAAGCTATGCTGGTTCATACAGGGTTTAGTGAGGGGAAGTTGCCTTTTAGGTACCTTGGGGTACCTCTATCCACATCAAGACTCACTAAAACACTGTGCAGTACTCTTATTGAAATGGTCAGACTGAAGATACAGCATTGGGCAAATAAATACTTGAGTTATGCTGGGAGGGTACAGTTGATTGCAGCTGTGTTATTCTCAATTCAGGTGTATTGGTGCTCAGTTCCTTTGGGGGTGGAAAGAAGGAGGGAAAACCTGGAGTACTATCTCTTGGGATACTATCTGCAAGCCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_327747.p1 GENE.R_Transcript_327747~~R_Transcript_327747.p1 ORF type:5prime_partial len:288 (+),score=36.13,RVT_1|PF00078.23|3.8e-37,RVT_1|PF00078.23|1.5e+03 R_Transcript_327747:3-866(+)
AFLPVRSITHNILLTHNLVHAYSRKNMSPRAMIKIDIQKAYDTVSWKFLKQVLLYFGFPVEMVDRIMTCVSTSQFSVNVNGGLHGFFKGRCGLRQGDPMSPYLFVLCMEILSRMLRMCFTEKGFKAHPRCGRNKLNHVIFADDMLLFSKGDKESVDVLQKTFNKFSRMSGLFANKDKSCMYFCGVQETEKEAMLVHTGFSEGKLPFRYLGVPLSTSRLTKTLCSTLIEMVRLKIQHWANKYLSYAGRVQLIAAVLFSIQVYWCSVPLGVERRRENLEYYLLGYYLQA*

Click here to download the sequence:
Link to NCBI Protein BLAST