Transcript Information: R_Transcript_32777.p1


Annotated TAIR IDAT1G55490.1
Annotated Gene Namechaperonin 60 beta
Annotated Gene Symbol(s)CPN60B, LEN1
Annotation TypeOrtholog
Chromosome Positionchr1:20715717-20718673 | Reverse length=600
E-Value1.1E-237
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.914460546457
Replicate 27.5857601504045
Replicate 39.4582658461533
Condition 2: 8 Hour
Replicate 16.7928528563325
Replicate 26.4437810036965
Replicate 39.2124303363684
Condition 3: 24 Hour
Replicate 19.1831228910816
Replicate 26.6877236635944
Replicate 312.614849152879


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_32777.p1 GENE.R_Transcript_32777~~R_Transcript_32777.p1 ORF type:3prime_partial len:465 (+),score=129.03,Cpn60_TCP1|PF00118.20|5.6e-60 R_Transcript_32777:170-1561(+)
ATGACATCAAGTTTCACAGCCATGTCTGGTGTAGGATCTTTGCTATCCACAGGAAGCCACTCATTTGACAAGAAAACTTTGGTCTTATCACACAAATTGTCTTCTTTGGATTGCATATCTTCTTGCTCTTTGAGAACCATTCCAAATGGTATAGTGCATAGGAAAAGATGTTCGCTTAAGGTTAAAGCTGCAACTAAAAAGTTGCACTTCAACAAGAATGGTTCTGCTATCAGGAAACTACAGGCAGGTGTTAATAAGCTTGCAGATTTGGTGGGTGTTACTCTTGGTCCAAAAGGAAGGAATGTTGTTTTGGAGAGCAAGTATGGTTCCCCCAAAATTGTTAATGACGGTGTGACTGTGGCCAAAGCGGTTGAGTTGGAAGATCCTGTGGAAAATATTGGAGCTAGACTTGTTCTTCAAGCTGCTTCCAAAACTAATGATTTAGCTGGTGATGGTACTACTACTTCTGTAGTCTTAGCTCAAGGGTTGATAGCTGAAGGCGTGAAGATTGTAATAGCTGGAGCAAATCCTATTCAAATTGCCAAGGGGATTGAGAACACTGCCAAAGCTTTGGTATCTGAGCTGAGGCTCATGTCCAAAGAGGTTGAAGACTCAGAACTTGCAGATGTGGCTGCTGTCAGTGCAGGCAATAACTACGAAATAGGAAACATGATTAGTGAAGCCATGCAAAAAGTGGGCCGTAAGGGTGTGGTGACTCTTGAAGAAGGAACAGGCGCCGTGAGCACCTTGTATGTTGTTGAAGGAATGCAATTCGATCGTGGCTATATCTCCCCTTACTTTGTTACAGATAGTGATAAAATGATTGTTGAGTACGAAAATTGCAAGTTGCTCTTGGTTGACAAAAAGGTCACAAATGCGAGGGACCTGGTTGGTGTCCTGGAGGATGCAATTAAAAACAACTACCCGATCTTGGTAATTGCAGAAGACATTGAGCAGGAACCTCTTGCTACGCTTGTCGTGAACAAGCTTAGAGGGTCACTTAGGATAGCTGCAATGAAGGCTCCAGGATATGGAGATGATCGAAGGCGCCAATATCTTGATGATATTGCTATCCTTACTGGAGGAATTGTGGTCAGAGATGAGGTTGGTTTGTCATTGGAAAAAGTTGGCTCCGAGGTTCTTGGAACTGCTGCCAAAGTGGTGCTTAACAAAGAGACAGCCACCTTTGTTGGGGATGGAAGCACACAAGATGCTGTCGCTAAGAGAATTGTCCAGATTAAGAAGCAAGTGGAGGAGACGGACCAGGAGTATGAAAAGACAAAGCTCAATGAGAGGATTGCAAAACTCTCCAGTGGTGTCGCCGTAATCCAGGTCGGAGCACAGACAGAGACTGAGATGAAAGAAAAGAAATTGAGAGTGGAGGATGCTCTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_32777.p1 GENE.R_Transcript_32777~~R_Transcript_32777.p1 ORF type:3prime_partial len:465 (+),score=129.03,Cpn60_TCP1|PF00118.20|5.6e-60 R_Transcript_32777:170-1561(+)
MTSSFTAMSGVGSLLSTGSHSFDKKTLVLSHKLSSLDCISSCSLRTIPNGIVHRKRCSLKVKAATKKLHFNKNGSAIRKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKAVELEDPVENIGARLVLQAASKTNDLAGDGTTTSVVLAQGLIAEGVKIVIAGANPIQIAKGIENTAKALVSELRLMSKEVEDSELADVAAVSAGNNYEIGNMISEAMQKVGRKGVVTLEEGTGAVSTLYVVEGMQFDRGYISPYFVTDSDKMIVEYENCKLLLVDKKVTNARDLVGVLEDAIKNNYPILVIAEDIEQEPLATLVVNKLRGSLRIAAMKAPGYGDDRRRQYLDDIAILTGGIVVRDEVGLSLEKVGSEVLGTAAKVVLNKETATFVGDGSTQDAVAKRIVQIKKQVEETDQEYEKTKLNERIAKLSSGVAVIQVGAQTETEMKEKKLRVEDAL

Click here to download the sequence:
Link to NCBI Protein BLAST