Transcript Information: R_Transcript_32904.p3


Annotated TAIR IDAT5G13710.1
Annotated Gene Namesterol methyltransferase 1
Annotated Gene Symbol(s)SMT1, CPH
Annotation TypeOrtholog
Chromosome Positionchr5:4424048-4426866 | Reverse length=336
E-Value4E-81
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1134.15926301718
Replicate 2130.17706258105
Replicate 3135.80423003433
Condition 2: 8 Hour
Replicate 1114.03417104003
Replicate 2125.70010006438
Replicate 3124.98680455752
Condition 3: 24 Hour
Replicate 1141.19051445038
Replicate 2138.94813101064
Replicate 3119.28799054359


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_32904.p3 GENE.R_Transcript_32904~~R_Transcript_32904.p3 ORF type:complete len:140 (+),score=33.09,Sterol_MT_C|PF08498.6|4.8e+03,Sterol_MT_C|PF08498.6|3.1e-31 R_Transcript_32904:1290-1709(+)
ATGACTGATGCCTTTAATCCGAATAGCCAAGAGAACCAGAAAATCAAGGCAGAAATTGAGCTCGGTGACGGCCTTCCAGACATTAGATCAACAAGAGAGTGCCTTGATGCCTTGAAGAAAGCAGGTTTTGAGGTTATTTGGGAGAAAGATCTTGCAGTTGACTCGCCAGTTCCTTGGTACTTGCCTTTGGATAAAAATCACTTTTCTTTGAGTAGTTTCCGTCTAACTTCTGTCGGACGTTTTGTAACAAGAAACCTGGTCAAGACTCTGGAATATGTTGGATTAGCTCCAAAGGGGAGTCAAAGAGTTCAATCTTTCCTGGAAAAGGCTGCAGAAGGACTTGTCGATGGTGGAAGGAGAGAGATCTTCACGCCTATGTTCTTCTTCTTGGCTAGGAAGCCTATTCAAAATAGCCAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_32904.p3 GENE.R_Transcript_32904~~R_Transcript_32904.p3 ORF type:complete len:140 (+),score=33.09,Sterol_MT_C|PF08498.6|4.8e+03,Sterol_MT_C|PF08498.6|3.1e-31 R_Transcript_32904:1290-1709(+)
MTDAFNPNSQENQKIKAEIELGDGLPDIRSTRECLDALKKAGFEVIWEKDLAVDSPVPWYLPLDKNHFSLSSFRLTSVGRFVTRNLVKTLEYVGLAPKGSQRVQSFLEKAAEGLVDGGRREIFTPMFFFLARKPIQNSQ*

Click here to download the sequence:
Link to NCBI Protein BLAST