Transcript Information: R_Transcript_32940.p1


Annotated TAIR IDAT3G20475.1
Annotated Gene NameMUTS-Homologue 5
Annotated Gene Symbol(s)ATMSH5, MSH5
Annotation TypeOrtholog
Chromosome Positionchr3:7143546-7150811 | Forward length=807
E-Value7.3E-103
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.47616419881875
Replicate 20.45644131339778
Replicate 30.39837804515048
Condition 2: 8 Hour
Replicate 10.21292056475865
Replicate 20.29166367618938
Replicate 30.15784009235119
Condition 3: 24 Hour
Replicate 11.8965145101147
Replicate 20.2876772898771
Replicate 30.19032786684258


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_32940.p1 GENE.R_Transcript_32940~~R_Transcript_32940.p1 ORF type:complete len:230 (+),score=30.63,MutS_III|PF05192.14|1.6e-17 R_Transcript_32940:824-1513(+)
ATGAAAAGTTCCACATTTAGTTATGAACAAGCTTGGCACAGACTGATTTATCTCAGAGTTTCAGGAATGGATGATGGCTTAAATGTTAAAGAGAGGATTACCTTTCTTAGTTCGATGATGTCTATCGAAAGTGAGGTTCAAGTTCGTGCTAGTGGGGGCCTTCTTGCAATATTGGAAAATGAAAGAATTGTTGACACCCTTGAACCAAAGGAATGGGAAGATGCATCAATTGCAATAGATTGTGTGACTGAGGTTTCACTAAACAAATTCCTCAAACTTGATGCAGCAGCTCATGAAGCATTGCAGATATTCCAAATAGACAAACATCCCAGCTCTATGGGTATTGGAAGATCGAAAGAAGGGTTTTCTGTCTTTGGAATGATGAATAAGTGTGTTACGCCAATGGGTCGACGTCTCTTGAGAAACTGGTTCCTAAGACCCATACTGGACCTGGGAATTCTGAACAGTCGGTTTGATGCTATATCGTTTTTCCTGTATTCCGAAGAACTGATGGTTTCATTACGGGGAACACTTAAATCTGTAAAAGATGTACCGTACATACTCAAGTTTGATATCTGGATTTGCACTGGTTTACATTGTGGTGTCCTCTTCTTCAAACACGATACAAGTCTGGATTCAAATAGTATCTACACATCAAAGGTGCATGTTTTTGTTTCCGATGCTTACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_32940.p1 GENE.R_Transcript_32940~~R_Transcript_32940.p1 ORF type:complete len:230 (+),score=30.63,MutS_III|PF05192.14|1.6e-17 R_Transcript_32940:824-1513(+)
MKSSTFSYEQAWHRLIYLRVSGMDDGLNVKERITFLSSMMSIESEVQVRASGGLLAILENERIVDTLEPKEWEDASIAIDCVTEVSLNKFLKLDAAAHEALQIFQIDKHPSSMGIGRSKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLGILNSRFDAISFFLYSEELMVSLRGTLKSVKDVPYILKFDIWICTGLHCGVLFFKHDTSLDSNSIYTSKVHVFVSDAY*

Click here to download the sequence:
Link to NCBI Protein BLAST