Transcript Information: R_Transcript_32945.p1


Annotated TAIR IDAT3G20475.1
Annotated Gene NameMUTS-Homologue 5
Annotated Gene Symbol(s)ATMSH5, MSH5
Annotation TypeOrtholog
Chromosome Positionchr3:7143546-7150811 | Forward length=807
E-Value6.1E-130
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.0237507214822
Replicate 22.8893991398575
Replicate 35.3589156761641
Condition 2: 8 Hour
Replicate 15.0544216634222
Replicate 23.7951955418526
Replicate 33.9966849072412
Condition 3: 24 Hour
Replicate 14.9496189894591
Replicate 22.3269309838682
Replicate 37.2289666855808


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_32945.p1 GENE.R_Transcript_32945~~R_Transcript_32945.p1 ORF type:3prime_partial len:218 (+),score=39.78,MutS_V|PF00488.17|1.8e+03,MutS_V|PF00488.17|2e-45 R_Transcript_32945:256-906(+)
ATGGAGAGGGCAATTACAAGGGATTTGATATCTCATATTCTCATGTTTTCAACACATTTGCTGAAGGCTGTGAGCTTTGCAGCAGAACTTGACTGTCTTTTGTCTTTGGCATTGGTTGCTCGTCAAAACAATTACGTAAGACCCATTCTGACTACCGATACTGTACTTGATATACAGAATGGAAGGCACATTTTGCAGGAAATGACAGTGGACACATTCATCCCGAATGACACAAAAATACTTGATGATGGAAGAATCAATATCATCACTGGTCCAAACTATTCTGGAAAAAGCATCTATATAAAACAGGTGGCCTTGATTGTTTTCCTCTCTCACATCGGGAGTTTCGTACCTGCCGATTCTGCTGTGGTAGGATTAACTGATAGGATATTTTGTGCAATGGGAAGCAAGCTTCTGACTGCTGAACAATCAACATTTATGATTGATCTACATCAAGTGGGTATGATGTTGAGGCAAGCTACTTCACGGTCCTTATGCCTCTTGGATGAATTTGGTAAAGGTACGCTGACAGAGGATGGCATTGGTCTTCTTGGTGGAACTGTGAATTATTTTGCGGCCAGTGATGATCCACCAAAGGTTCTAGTTTGTACTCACTTGTCTGAAATATTTAATGCGGATTTGTTGCCAAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_32945.p1 GENE.R_Transcript_32945~~R_Transcript_32945.p1 ORF type:3prime_partial len:218 (+),score=39.78,MutS_V|PF00488.17|1.8e+03,MutS_V|PF00488.17|2e-45 R_Transcript_32945:256-906(+)
MERAITRDLISHILMFSTHLLKAVSFAAELDCLLSLALVARQNNYVRPILTTDTVLDIQNGRHILQEMTVDTFIPNDTKILDDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADSAVVGLTDRIFCAMGSKLLTAEQSTFMIDLHQVGMMLRQATSRSLCLLDEFGKGTLTEDGIGLLGGTVNYFAASDDPPKVLVCTHLSEIFNADLLPK

Click here to download the sequence:
Link to NCBI Protein BLAST