Transcript Information: R_Transcript_329452.p1


Annotated TAIR IDAT3G57230.1
Annotated Gene NameAGAMOUS-like 16
Annotated Gene Symbol(s)AGL16
Annotation TypeOrtholog
Chromosome Positionchr3:21177710-21180671 | Forward length=240
E-Value1E-74
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.20169017629524
Replicate 20.11600165975855
Replicate 30.12655656130471
Condition 2: 8 Hour
Replicate 10.13528102180799
Replicate 20.24708156730592
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.24370451812793
Replicate 30.24185309046295


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_329452.p1 GENE.R_Transcript_329452~~R_Transcript_329452.p1 ORF type:5prime_partial len:181 (+),score=32.77,K-box|PF01486.13|6.2e-27,K-box|PF01486.13|9.4e+02,SRF-TF|PF00319.14|2.4e-25,SRF-TF|PF00319.14|1.9e+03 R_Transcript_329452:3-545(+)
ATAGATAATTCAACAAGCAGACAAGTGACGTTCTCAAAGCGAAGAAATGGATTGATGAAGAAAGCAAGAGAACTTTCCATACTTTGTGATGCTGAGCTTGGATTGATCATCTTCTCAAGTACTGGCAAACTCTATGAGTTTAGCAGCTCCAACATGAGATCAGTGATAGAGAGATATCAGAAGATGAAGGACAGTCATCAATCACCAACTGCTGCTTTGGATGTTAAGTTTTGGCAAAGGGAGGCAGCACGGTTGAGGCAACAAATACACTGCTTACAAGAAAACCACAGGAAACTCACAGGTGAAGAAATTTCAGGTTTGAGCATCAAAGACCTCCAGAATTTAGAAAATCAATTAGAAGCAAGTTTGAAAGGCATCCGTATGCAGAAAGACCAACTTCTTGCAACTCAGATCAAAGAACTTAACCGCAGGGAGGGCCTCATTCGTCAAGAGAATATCGAACTCTATCAAAAGCTTAACCTTGTGCAACACGAAAATTCAGTGCTCCGAAAGAAGGTACTATTTGTCACCTCACTCATATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_329452.p1 GENE.R_Transcript_329452~~R_Transcript_329452.p1 ORF type:5prime_partial len:181 (+),score=32.77,K-box|PF01486.13|6.2e-27,K-box|PF01486.13|9.4e+02,SRF-TF|PF00319.14|2.4e-25,SRF-TF|PF00319.14|1.9e+03 R_Transcript_329452:3-545(+)
IDNSTSRQVTFSKRRNGLMKKARELSILCDAELGLIIFSSTGKLYEFSSSNMRSVIERYQKMKDSHQSPTAALDVKFWQREAARLRQQIHCLQENHRKLTGEEISGLSIKDLQNLENQLEASLKGIRMQKDQLLATQIKELNRREGLIRQENIELYQKLNLVQHENSVLRKKVLFVTSLI*

Click here to download the sequence:
Link to NCBI Protein BLAST