Transcript Information: R_Transcript_32952.p1


Annotated TAIR IDAT3G20475.1
Annotated Gene NameMUTS-Homologue 5
Annotated Gene Symbol(s)ATMSH5, MSH5
Annotation TypeOrtholog
Chromosome Positionchr3:7143546-7150811 | Forward length=807
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.9390888382524
Replicate 21.882646997814
Replicate 32.6805756761455
Condition 2: 8 Hour
Replicate 12.4932415675766
Replicate 23.2623778978021
Replicate 33.8068727440933
Condition 3: 24 Hour
Replicate 14.1519438603295
Replicate 23.4859375754104
Replicate 34.6569584440207


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_32952.p1 GENE.R_Transcript_32952~~R_Transcript_32952.p1 ORF type:complete len:658 (+),score=104.72,MutS_V|PF00488.17|5.4e-30,MutS_III|PF05192.14|6.4e-28 R_Transcript_32952:169-2142(+)
ATGGAGGAAGAGGTCGACGAAACCGAACCGCAATCTCAGGTTTACATGGCATGTATCATGCATGGTCACAGAATTGGAGTTTCTTATTATGATTCGAGTGTCCGGCAACTAAGTGTACTTGAAGTTTGGGAGGATGGTGTAGACTATCCCTTAATTGATTTGATTAAGTATCAGGCACAGCCTCTGATCATCTACACCAGTACCAAAAGTGAAGAATCATTCTTGTCAGCTTTACAGAGAAGTGATGGAATAAATTTTGAGCCAACAGTGAAGCTTATGAAAAGTTCCACATTTAGTTATGAACAAGCTTGGCACAGACTGATTTATCTCAGAGTTTCAGGAATGGATGATGGCTTAAATGTTAAAGAGAGGATTACCTTTCTTAGTTCGATGATGTCTATCGAAAGTGAGGTTCAAGTTCGTGCTAGTGGGGGCCTTCTTGCAATATTGGAAAATGAAAGAATTGTTGACACCCTTGAACCAAAGGAATGGGAAGATGCATCAATTGCAATAGATTGTGTGACTGAGGTTTCACTAAACAAATTCCTCAAACTTGATGCAGCAGCTCATGAAGCATTGCAGATATTCCAAATAGACAAACATCCCAGCTCTATGGGTATTGGAAGATCGAAAGAAGGGTTTTCTGTCTTTGGAATGATGAATAAGTGTGTTACGCCAATGGGTCGACGTCTCTTGAGAAACTGGTTCCTAAGACCCATACTGGACCTGGGAATTCTGAACAGTCGGTTTGATGCTATATCGTTTTTCCTGTATTCCGAAGAACTGATGGTTTCATTACGGGGAACACTTAAATCTGTAAAAGATGTACCGTACATACTCAAGAAATTCAATTCCCCAAGCTCTTTGTGCACGAGCAATGACTGGACAGCTTTTTTGAAGAGCCTTTCTTCTGTCTTGCACCTGAACAAAATATTTGAAGTAGGCATTTCTGAGAGTCTGAGGGAGCAAGTCAGCCATTTCAATCTGGATTTTATTGACAAGGCAGCTACTTGCATTACAACGGAGCTGTCTTATATCTATGAACTGGTTATTGGTGTCATCGATGTAACTAGAATAAAAGAAAAAGGTTACGAATCAATCATTAAAGAGGGTTTCTGTGAAGAGCTGGATGAACTCAGACAAATATATGAGGAACTACCAGAACTTCTGGAAGAGGTCTCATCACTGGAGCTTGCAAGGCTTCCACATTTATGTAGAGACAAACATGTTCCTTCTATCATTTACTTACATCAAATAGGATACTTGTTGTGCATCTTTGAAGAAAAACTTGATGAGTCCATACTACAAGCTCTTGAAGATGTTGAATTTGCTTTTTCTGATGGTGATAGTGAGCCAAGAAGATTTTTCTATCGTACATCAAAGACAAGAGAGTTGGACAACCTTCTCGGAGATATATATCACAAAATTCTGGACATGGAGAGGGCAATTACAAGGGATTTGATATCTCATATTCTCATGTTTTCAACACATTTGCTGAAGGCTGTGAGCTTTGCAGCAGAACTTGACTGTCTTTTGTCTTTGGCATTGGTTGCTCGTCAAAACAATTACGTAAGACCCATTCTGACTACCGATACTGTACTTGATATACAGAATGGAAGGCACATTTTGCAGGAAATGACAGTGGACACATTCATCCCGAATGACACAAAAATACTTGATGATGGAAGAATCAATATCATCACTGGTCCAAACTATTCTGGAAAAAGCATCTATATAAAACAGGTGGCCTTGATTGTTTTCCTCTCTCACATCGGGAGTTTCGTACCTGCCGATTCTGCTGTGGTAGGATTAACTGATAGGATATTTTGTGCAATGGGAAGCAAGCTTCTGACTGCTGAACAATCAACATTTATGATTGATCTACATCAAGTGGGTATGATGTTGAGGTATATGCGAATAGGAGCTGGAGGGAGTAGTGTGTGTAGAAGCATGCTATTCTCAACTACTATATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_32952.p1 GENE.R_Transcript_32952~~R_Transcript_32952.p1 ORF type:complete len:658 (+),score=104.72,MutS_V|PF00488.17|5.4e-30,MutS_III|PF05192.14|6.4e-28 R_Transcript_32952:169-2142(+)
MEEEVDETEPQSQVYMACIMHGHRIGVSYYDSSVRQLSVLEVWEDGVDYPLIDLIKYQAQPLIIYTSTKSEESFLSALQRSDGINFEPTVKLMKSSTFSYEQAWHRLIYLRVSGMDDGLNVKERITFLSSMMSIESEVQVRASGGLLAILENERIVDTLEPKEWEDASIAIDCVTEVSLNKFLKLDAAAHEALQIFQIDKHPSSMGIGRSKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLGILNSRFDAISFFLYSEELMVSLRGTLKSVKDVPYILKKFNSPSSLCTSNDWTAFLKSLSSVLHLNKIFEVGISESLREQVSHFNLDFIDKAATCITTELSYIYELVIGVIDVTRIKEKGYESIIKEGFCEELDELRQIYEELPELLEEVSSLELARLPHLCRDKHVPSIIYLHQIGYLLCIFEEKLDESILQALEDVEFAFSDGDSEPRRFFYRTSKTRELDNLLGDIYHKILDMERAITRDLISHILMFSTHLLKAVSFAAELDCLLSLALVARQNNYVRPILTTDTVLDIQNGRHILQEMTVDTFIPNDTKILDDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADSAVVGLTDRIFCAMGSKLLTAEQSTFMIDLHQVGMMLRYMRIGAGGSSVCRSMLFSTTI*

Click here to download the sequence:
Link to NCBI Protein BLAST