Transcript Information: R_Transcript_329658.p1


Annotated TAIR IDAT2G16880.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:7312262-7314493 | Reverse length=743
E-Value4E-32
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.59262860242593
Replicate 20.13633961309285
Replicate 30
Condition 2: 8 Hour
Replicate 10.31799824606812
Replicate 20.29040106287254
Replicate 30.11786760143108
Condition 3: 24 Hour
Replicate 10.14907667030977
Replicate 20.42964790046579
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_329658.p1 GENE.R_Transcript_329658~~R_Transcript_329658.p1 ORF type:internal len:154 (+),score=12.49,PPR_2|PF13041.2|6.5e-08,PPR_2|PF13041.2|1.2e-07,PPR_2|PF13041.2|1.1e-14,PPR_1|PF12854.3|0.032,PPR_1|PF12854.3|3.6e+02,PPR_1|PF12854.3|6.8e+02,PPR_1|PF12854.3|4.7e-09,PPR_1|PF12854.3|1.8e-08,PPR|PF01535.16|0.037,PPR|PF01535.16|87,PPR|PF01535.16|3e+02,PPR|PF01535.16|0.00037,PPR|PF01535.16|0.02,PPR_3|PF13812.2|3.3,PPR_3|PF13812.2|0.025,PPR_3|PF13812.2|62,PPR_3|PF13812.2|1.5 R_Transcript_329658:1-459(+)
TTACTTTCCTTCATCTCCACAGACACTTCTCACACTCTTCACAAACACCTCCTTCACCCATCTTCACAATTACCTCAACCAACAACAGCCCTTTATGACACAACAATTGGGTCATATTGTCAAGTGGGTAATCCCCATTTTGCCATTCCCATCTTCAAAAAGATGAAGCGCTTAAGGCTCAAACCAAAGCTCCTAACTTGCAACACTTTGTTTAATGCCCTGGTAAAAAACCCATCTTCTCATTCTCTCTATTTCTGTAGGGAATTGTTTGATGACATGACTAAAAAACTTGGGATTTCCCCAAATGTTAATACTTTCAATATTTTGATTAATGGGCATTGCTTAGAATTTAGATTCAAGGAGGCTTTGGATATGCTTAGTTTAATGGGGTTTTTTAATTGTTCCCCTGATAATGTCACTTATAATACTATATTGAATGCTTTGTGTAGAAAAGGTAGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_329658.p1 GENE.R_Transcript_329658~~R_Transcript_329658.p1 ORF type:internal len:154 (+),score=12.49,PPR_2|PF13041.2|6.5e-08,PPR_2|PF13041.2|1.2e-07,PPR_2|PF13041.2|1.1e-14,PPR_1|PF12854.3|0.032,PPR_1|PF12854.3|3.6e+02,PPR_1|PF12854.3|6.8e+02,PPR_1|PF12854.3|4.7e-09,PPR_1|PF12854.3|1.8e-08,PPR|PF01535.16|0.037,PPR|PF01535.16|87,PPR|PF01535.16|3e+02,PPR|PF01535.16|0.00037,PPR|PF01535.16|0.02,PPR_3|PF13812.2|3.3,PPR_3|PF13812.2|0.025,PPR_3|PF13812.2|62,PPR_3|PF13812.2|1.5 R_Transcript_329658:1-459(+)
LLSFISTDTSHTLHKHLLHPSSQLPQPTTALYDTTIGSYCQVGNPHFAIPIFKKMKRLRLKPKLLTCNTLFNALVKNPSSHSLYFCRELFDDMTKKLGISPNVNTFNILINGHCLEFRFKEALDMLSLMGFFNCSPDNVTYNTILNALCRKGR

Click here to download the sequence:
Link to NCBI Protein BLAST