Transcript Information: R_Transcript_33014.p1


Annotated TAIR IDAT1G78610.1
Annotated Gene Namemechanosensitive channel of small conductance-like 6
Annotated Gene Symbol(s)MSL6
Annotation TypeOrtholog
Chromosome Positionchr1:29569226-29572126 | Reverse length=856
E-Value1.2E-286
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.7870258368625
Replicate 24.5964270836954
Replicate 36.7916894679347
Condition 2: 8 Hour
Replicate 18.8731986684491
Replicate 29.4813941069427
Replicate 314.660174358655
Condition 3: 24 Hour
Replicate 114.028415681116
Replicate 210.82840553395
Replicate 314.8631703453


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_33014.p1 GENE.R_Transcript_33014~~R_Transcript_33014.p1 ORF type:complete len:941 (+),score=210.07,MS_channel|PF00924.14|7.3e-25 R_Transcript_33014:191-3013(+)
ATGGAAGGTTTCAAAGTAGCCAGCCCATTGAGAAAAGGAGGGTCTCCTTCACCTTCTCGCAAAGACAAAAAGAAGCATCAAGAAGAGGAAAAGCTCATACTACTCCAAAACAGGAACGACCCAATGGCTCAATCCTTCAACAAAGATGACCCAAAATCTGAACTTTCTCTTAAAATAGACAATTTCAGCAAAACCCCATCTCCTTCTTCAACTTCTCCTTCAACATTGCCAGAGATTTCACCAACTGTGGGGGGCCCACCTCAAAAACAACAACACCAAAATATCTGGAGAGATTCAAGCTATGACTTCAGGAATGATACTGTTCCAATCCCACCAAGAAAAAGCACTCAAAGTCACCCATCAAACAACTCTGATGATGGTGATTCATCAGATTCTAAGGAGTTTGATTTTCCAAAGCAAAACAAGGATGAACAACAAGAACAAGACTTGGAGAACCAGTGTATGTCTCCTGTTTCAGAGAGCCCCAACAATGAGTATGGTAAGATTACTCCAAGAGCTGCTAATGTTGGTAATAGAGTTTCTTTTAAGGAATGTGAACTTGTTCAAAGACATAGGAGTTCTAACTTTGGTGCTCATAATAACAATAATAATTATGGTGTTGGTGTTAGTGGAGGAGGAGATGATGAACAAGTTGTTATTCAGTGTAGTGCAAGTGCTTCTTTTAATAGACAGCAAAAATCTGGGATTTTGAGAACTAAGACTAAGTCAAGGTTGATGGACCCACCTGAGGATGTGGGAGTTGGTGTTCAAGGTCCTGATAAGAGATCAGGTAGAACTATGAGGTCAGGGTTTTTGGGTAGGAGTGAAGAGATTGAAGAAGATGATCCTTTTTTGGATGATGATATTCCTGAAGAGTATAAGAAGGTTAAATTTAGTTGCTTTTCTATTATTCAATGGGTTACTTTGGTTTTAGTTATTGCTGCTGCTGTTTGTAGTGTTGCTATTCCTGTTTTGATGGGGAAAACTATTTGGGGTATGCAAATTTGGAAGTGGGCTGTTATGGTTTTGGTTTTAATTTGTGGGGGTTTGGTTTCTGGTTGGTTGATTAGGATTGTTGTGTTCTTTATTGAGAGGAATTTCTTGCTTAGGAAGAGGGTTTTGTATTTTGTGTATGGGTTAAGGAGTTCTGTTCAGAAGTTTTTGTGGTTAGGTTGGGTTTTACTTGCTTGGAATTTGATTCTTGATAAGAAGGTTGAGAAGGAGACTAATAGTAAGGTTTTGCCTTATGTCACCAAGATTTTGATTTGTTTTATGGTGGCTACATTGATGTGGTTGGTCAAGACTTTACTCCTCAAGGTGCTTGCTATGAATTTCCATGTCAGCGCCTTCTTCGATAGGATTCAGGATGCTTTGTTTAATCAGTATGTGATCGAGACGCTCTCTGCACCGCCTTACATTGAGCTCCAGCGTATCCAGGATGAGGAGGATAGAGTTATGACTGAGGTTCAGAAGCTTCAGAGTGCTGGGATTCATGTCCCAGCTGATCTTAGGGCGAATTGCTTGCCTAATAATGGGAAAACATCGGGGAGTGGGAGGTCGACTGCTAGTGGTTTGCAAAGGAGCCCCTTCATTGGTAAGAGTCCTAAGAGTTCTGTCTTTGGTAAGAGCCCTAAGTTTTCAAGGGCGCCGTCTAAGAGAGAAGAGGAACAAGAGGATGGGGGGATTAGTATTGATCACTTGCACCGGCTTAATCAGAAGAATGTGTCTGCCTGGAATATGAAGAGGTTGATGAATACAGTGAGGAAGGGGGTTCTATCAACTCTCGATGAGCAGCTTGACTCAGGCATCGAGGATGACTCAGCATTGCAGATTCGAAGTGAGAAGGAAGCAAAGGCTGCTGCTAAGAGGATATTCACTAATGTGGCCAGACCAGGTTCAAAGCATATTCATTTGGAGGATCTGATGCGATTTTTGAGAGAAGATGAAGCACACAGGGCAATGCAGCTCTTGGAAGGATCCGTTGACAGGTCTGGTAATAGCAAAGGAATCAGCAAGCGGGCTCTCAAGAATTGGGTGGTTAATGTATTCAGAGAAAGGAGAGCCCTTGCACTCTCTCTCAACGATACAAAGACAGCTGTGAACAAGCTTCACCATCTGGTGAATATTCTTGTTGGTATTGCCATAATTATTATCTGGCTTCTAATCCTTGGCATCCCAGTTACTCACTTCCTGGTCTTTGTGAGCTCCCAAGTTGTGGTGCTGGCTTTTATGTTTGGAAACACTTGCAAAACAACCTTTGAAGCAATCATATTTTTGTTTGTTATGCATCCATTTGACGTTGGTGATCGTTGTGAAATTGAGGGAGTTCAGATGATCGTGGAGGAGATGAATATATTGACTACTGTTTTTCTGAGATACGACAACCAAAAGATCATTTATCCTAACAGTGTGCTAGCAACCAAGCCTATCGCTAACTACTATAGGAGTCCGGATATGGGAGATTTCATTGATTTCGTTGTCCACATCTCGACTCCCGTGGAAAAGATGGCTATCATGAAGGAAAGAATAACAAGGTATGTCGATAACAAGAAAGAGCACTGGTACCCAGCACCAATGATAGTCATGAGAGATGTAGAAGACATGAACAGGATTAAGTTTTCAGTATGGGTATCGCATACAATGAACCATCAAGACATGGGAGAGAGGTGGGCACGGCGAGCCCTTCTTGTTGAGGAAATGATCAAGATCTTCAAGGATCTCGATATCGAGTACCGCATGTTGCCCATGGACGTTAACGTCAGAGCATTGCCGGCTTTAGTTTCTGACAGGCTTCCGTCTAACTGGACTGCCACCTTGAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_33014.p1 GENE.R_Transcript_33014~~R_Transcript_33014.p1 ORF type:complete len:941 (+),score=210.07,MS_channel|PF00924.14|7.3e-25 R_Transcript_33014:191-3013(+)
MEGFKVASPLRKGGSPSPSRKDKKKHQEEEKLILLQNRNDPMAQSFNKDDPKSELSLKIDNFSKTPSPSSTSPSTLPEISPTVGGPPQKQQHQNIWRDSSYDFRNDTVPIPPRKSTQSHPSNNSDDGDSSDSKEFDFPKQNKDEQQEQDLENQCMSPVSESPNNEYGKITPRAANVGNRVSFKECELVQRHRSSNFGAHNNNNNYGVGVSGGGDDEQVVIQCSASASFNRQQKSGILRTKTKSRLMDPPEDVGVGVQGPDKRSGRTMRSGFLGRSEEIEEDDPFLDDDIPEEYKKVKFSCFSIIQWVTLVLVIAAAVCSVAIPVLMGKTIWGMQIWKWAVMVLVLICGGLVSGWLIRIVVFFIERNFLLRKRVLYFVYGLRSSVQKFLWLGWVLLAWNLILDKKVEKETNSKVLPYVTKILICFMVATLMWLVKTLLLKVLAMNFHVSAFFDRIQDALFNQYVIETLSAPPYIELQRIQDEEDRVMTEVQKLQSAGIHVPADLRANCLPNNGKTSGSGRSTASGLQRSPFIGKSPKSSVFGKSPKFSRAPSKREEEQEDGGISIDHLHRLNQKNVSAWNMKRLMNTVRKGVLSTLDEQLDSGIEDDSALQIRSEKEAKAAAKRIFTNVARPGSKHIHLEDLMRFLREDEAHRAMQLLEGSVDRSGNSKGISKRALKNWVVNVFRERRALALSLNDTKTAVNKLHHLVNILVGIAIIIIWLLILGIPVTHFLVFVSSQVVVLAFMFGNTCKTTFEAIIFLFVMHPFDVGDRCEIEGVQMIVEEMNILTTVFLRYDNQKIIYPNSVLATKPIANYYRSPDMGDFIDFVVHISTPVEKMAIMKERITRYVDNKKEHWYPAPMIVMRDVEDMNRIKFSVWVSHTMNHQDMGERWARRALLVEEMIKIFKDLDIEYRMLPMDVNVRALPALVSDRLPSNWTATLR*

Click here to download the sequence:
Link to NCBI Protein BLAST