Transcript Information: R_Transcript_330376.p1


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value1E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.43459430844568
Replicate 20.19996476586951
Replicate 30
Condition 2: 8 Hour
Replicate 10.11659935689164
Replicate 20.63888233831959
Replicate 30.34574496419785
Condition 3: 24 Hour
Replicate 10.54661445780248
Replicate 20
Replicate 30.2084543303514


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_330376.p1 GENE.R_Transcript_330376~~R_Transcript_330376.p1 ORF type:internal len:210 (+),score=24.05,gag_pre-integrs|PF13976.2|5.4e-16 R_Transcript_330376:2-628(+)
GGTGTAGTTGTTTGTCACTCCGATGGTGAATTGTATATAGCCATAGATTCTGACGATAAGGCTAAATCTCAATGGATTTTTGACTCGGGTTGTACTTTTCATATGTGTCCACACCGTGATTGGTTTGACTCTTATAAGAGTGTTAACGGTGGCATTGTTTATATGGGTAACAATGCTACATGTAAGGTTGTCGGGAGAGGGAATGTTAAAATTAAAGTTCATGATGGTACCACCCGTACTCTGTCAGGTGTTAGACATGTTCCCGACCTTCATAGAAATATTATATCTCTTGGTACCCTTGAATCATTGGGATGTCACTACTCCACTCAAGGTGGAGTTCTTAAGGTGTCTAAGGGGTCATTTGTTTTGATGAAAGGCTCTAGAATTGGGTCTTTATATGTGTTGCAAGGTTCTACCATCACCGGTTCCACCGCCATTGCTTCAGCATCTAGTACCACTGAATTCAAACTATGGCATATGCGTTTGGGACATATGGGTGAGAAAGGCATGGATATTCTCTGTAAGCATGGTTTGCTTGGCTCAACTAATAATTGTGAAGTTGATTTTTGTGTGGATTGTGTATATGGCAAGCAAAAGAGAGTTAGCTTCTTACTGGCAATTCATAGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_330376.p1 GENE.R_Transcript_330376~~R_Transcript_330376.p1 ORF type:internal len:210 (+),score=24.05,gag_pre-integrs|PF13976.2|5.4e-16 R_Transcript_330376:2-628(+)
GVVVCHSDGELYIAIDSDDKAKSQWIFDSGCTFHMCPHRDWFDSYKSVNGGIVYMGNNATCKVVGRGNVKIKVHDGTTRTLSGVRHVPDLHRNIISLGTLESLGCHYSTQGGVLKVSKGSFVLMKGSRIGSLYVLQGSTITGSTAIASASSTTEFKLWHMRLGHMGEKGMDILCKHGLLGSTNNCEVDFCVDCVYGKQKRVSFLLAIHR

Click here to download the sequence:
Link to NCBI Protein BLAST