Transcript Information: R_Transcript_33050.p1


Annotated TAIR IDAT3G01810.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: nucleolar protein gar2-related (TAIR:AT2G42320.2); Has 1327 Blast hits to 470 proteins in 132 species: Archae - 2; Bacteria - 131; Metazoa - 139; Fungi - 114; Plants - 114; Viruses - 0; Other Eukaryotes - 827 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:289218-292557 | Forward length=921
E-Value1.1E-295
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.765223745813
Replicate 27.0291962263259
Replicate 37.6687773691467
Condition 2: 8 Hour
Replicate 18.2506718843978
Replicate 27.5103396618765
Replicate 39.6677056565104
Condition 3: 24 Hour
Replicate 112.576885698655
Replicate 29.8769202857803
Replicate 311.44346299391


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_33050.p1 GENE.R_Transcript_33050~~R_Transcript_33050.p1 ORF type:complete len:920 (+),score=220.85,NT-C2|PF10358.5|1.2e-09 R_Transcript_33050:232-2991(+)
ATGGTTTTAGGTCTTAGGGCCAAAACTAGAAGGGGTCCCAATGTTCAGGTTGAGTACCTCATCCATGTTCAGGAAATCAAGCCTTGGCCACCTACACAATCATTGAAAAATCTTCGCTCTGTCTTGATCCAATGGGAAAACGGGGATCGCAATTCTGGTTCTACTAGCTCTGTGGCTCCTTCTGTCGATGATGGAAAAATCGAGTTCAATGAGTCTTTTAAGCTTCCTGCTGTTTTGTCAAGGGATATGTCTGTCAAAAATGGGGATGTGGATGTGTTTCATAAAAACTTGCTGGAGTTCAACTTGTATGAGCCTCGGAGAGATAAGACATTAAAAGGACAGTTGCTTGGGACAGCCATTGTAGACTTAGCTGACTATGTTGTGATTAACGAAATTACCAATGTAAGTGTTCCCATGAACTGTACGAGGAGCTTCAGGAACACTGCCCAGCCCATTTTGTACCTTAGAATCCAGTCCTATGATAAGGTTCGCTCGAACTCATCATTAAGGGGCAGATTGGCAAAAGAAGCATCCTTGGACAAAAATGGTGGAGACTCAGTTTCAGCTCTGATGAGTGAGGAGTATGCTGATGAAACCGAGGTTGCTTCCTTGGCTGATGACGATGTTTCATCGCACTCCTCGTTGACTGCCTCATCTGCTCATGCATCTAGTGGAGGTTCACCTTCACATAACAAGGAGATTGGCACAGGCAGGGGAAAAGACCTTACAGAGATGGGAACAGACAAACAAGAACTGGACCTAAAGCTGGCTCATCAAAGATCAGATACCAAGATAGTCAAGGAATCAAATGACAATTCGAAGGATGGCTCTTCACTTGGTGCCTCTGTAGAAGTTTCTTCTGATCATAGGAGCCCAAATAATGCACCTGCTTCTTTATCTGACAACTCTGACTTGGAGTCTGAGTCAAATTCAGCAAAATCTTTTGCCTCTGGTCCAGTGAATGTGTCTGGTAATCAAGATACTGAAAGCGATGCTCCAGCTTTGAATCGCAATAGATTCAAACAAGTTAAATCAGTTCGATCCCCGATGGATTCTGCCCGGAGCAATGGCCTTCCGGGTGGTGGTTCTGGAGCTCCAGTGAAGCATGAAGCTAAGATTTATCCAGTAGATAAAGGTAGTGCCTCAGCTAACACTAAAGCTCAAGAGCTCGAACAAAGAATAAAGATGCTAGAGGGAGAATTGAGAGAAGCTGCTGGTATTGAGGTCTCACTATATTCAGTAGTTGCAGAGCATGGTAGCTCTGTAAATAAGGTTCATGCCCCGGCAAGGCGGCTTTCTAGACTGTATTTGCAAGCAAGCAAAGGAATGAGGAGAGCCAATGCAGCGCAAAGCGCAGTTTCAGGACTGGTTGTGGTGGCAAAAGCTTGTGGAAATGATGTCCCTCGGTTGACCTTTTGGTTGTCAAACTGCATTGTTCTCCGAGCAATTGTTAGTGAGGCATTCGTGAATGAGCTGTTGCCAATATCTGCTGGAACTTCATCTGAACATAGTGGAGCCAAGGGAATGAGCAAGAAACCAGCATCACTGAAGTGGAAAGTTACATCTTCTGAAAAGAAAGGAACGAAAGATTTTTTGGGTAGAGGTGTTGAAGATTTGGAAGATCCACATGCATTTATATCTGCATTGGAAAAAGTTGAATCTTGGATCTTTTCACGAATTATCGAATCTGTTTGGTGGCAGACTTTGACTCCACATATGCAATCTTCAGCTGCCAAGGCAATAGATAAAGTGGTTGATTCTGGCACTAAAAGAAACTATAAGAGGACATCCAGTTCTGCTGATCAAGGGCAGGTGAATTTCTCATTAGAGCTTTGGAAGAAGGCATTCAAGGATGCCTGTGAAAGGCTCTGTCCTGTCCGAGCTGGAGGTCATGAGTGTGGCTGTTTGCCAGTTCTGTCTAAATTGATAATGGAGCAATGTGTTGTGAGGTTGGATGTGGCCATGTTTAATGCTGTCCTTCGAGAATCTGCCGATGACATTCCAACTGATCCTGTATCCGATCCAATCAGTGACTCCAAAGTTCTTCCAGTACAGGCCGGAAGATCAAGCTTTGGTGCTGGCGCACAACTTAAGAATGCGATTGGAAACTGGTCTCGATGGTTGACTGATCTTTTTGGGTTGGATGATGATGATGCACCAGAAGATGATGACGACTACGATAATTATGATCAAATTCATAAACATGATTCATCCTTCAGATCTTTCCATCTATTAAAATCATTGAGCGATCTCATGATGCTTCCAAAGGACATGCTACTAAGCGAATCAATTCGAAGAGAGGTATGTCCTACATTTGGTGCCCCACTCATCAAAAGGGTCCTTGAAAATTTTGTTCCAGACGAGTTCTGCCCTGACCCCATTCCGGATGCTGTTTTTGAAGCATTGGATTCTGAGGATGCCCTTGCAGAAGGAGGATCAACCATGAATTTTCCTTTTCCAGCACCAGCAGTATCTTATTCTCCTCCTCCAGCATCATCACTGATGAGTATAACAAACAGAGGTATGGGACAAGGAAGCCAATCTGAGCTACGAAGAAGCACTTCAGTGCTTCGAAGATCAAACACCAGTGATGATGAGTTAGATGAGCTTGATTCACCCTTGAATTCTATTTTAGGCGACAATTTCCAAGCATCGCCTACTCAAATGAGACAAAACCGCAAAGTGCTACAAAATCATGGTAAACATGCTGTCAGATATCAACTTCTGCGTCAAGTTTGGGACAAGGAACATGGATTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_33050.p1 GENE.R_Transcript_33050~~R_Transcript_33050.p1 ORF type:complete len:920 (+),score=220.85,NT-C2|PF10358.5|1.2e-09 R_Transcript_33050:232-2991(+)
MVLGLRAKTRRGPNVQVEYLIHVQEIKPWPPTQSLKNLRSVLIQWENGDRNSGSTSSVAPSVDDGKIEFNESFKLPAVLSRDMSVKNGDVDVFHKNLLEFNLYEPRRDKTLKGQLLGTAIVDLADYVVINEITNVSVPMNCTRSFRNTAQPILYLRIQSYDKVRSNSSLRGRLAKEASLDKNGGDSVSALMSEEYADETEVASLADDDVSSHSSLTASSAHASSGGSPSHNKEIGTGRGKDLTEMGTDKQELDLKLAHQRSDTKIVKESNDNSKDGSSLGASVEVSSDHRSPNNAPASLSDNSDLESESNSAKSFASGPVNVSGNQDTESDAPALNRNRFKQVKSVRSPMDSARSNGLPGGGSGAPVKHEAKIYPVDKGSASANTKAQELEQRIKMLEGELREAAGIEVSLYSVVAEHGSSVNKVHAPARRLSRLYLQASKGMRRANAAQSAVSGLVVVAKACGNDVPRLTFWLSNCIVLRAIVSEAFVNELLPISAGTSSEHSGAKGMSKKPASLKWKVTSSEKKGTKDFLGRGVEDLEDPHAFISALEKVESWIFSRIIESVWWQTLTPHMQSSAAKAIDKVVDSGTKRNYKRTSSSADQGQVNFSLELWKKAFKDACERLCPVRAGGHECGCLPVLSKLIMEQCVVRLDVAMFNAVLRESADDIPTDPVSDPISDSKVLPVQAGRSSFGAGAQLKNAIGNWSRWLTDLFGLDDDDAPEDDDDYDNYDQIHKHDSSFRSFHLLKSLSDLMMLPKDMLLSESIRREVCPTFGAPLIKRVLENFVPDEFCPDPIPDAVFEALDSEDALAEGGSTMNFPFPAPAVSYSPPPASSLMSITNRGMGQGSQSELRRSTSVLRRSNTSDDELDELDSPLNSILGDNFQASPTQMRQNRKVLQNHGKHAVRYQLLRQVWDKEHGF*

Click here to download the sequence:
Link to NCBI Protein BLAST