Transcript Information: R_Transcript_33052.p1


Annotated TAIR IDAT3G01810.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: nucleolar protein gar2-related (TAIR:AT2G42320.2); Has 1327 Blast hits to 470 proteins in 132 species: Archae - 2; Bacteria - 131; Metazoa - 139; Fungi - 114; Plants - 114; Viruses - 0; Other Eukaryotes - 827 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:289218-292557 | Forward length=921
E-Value3E-152
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.35328311525262
Replicate 20
Replicate 30.059114161538458
Condition 2: 8 Hour
Replicate 10.28435198003252
Replicate 20.05770550152564
Replicate 30.44500722811271
Condition 3: 24 Hour
Replicate 10.71095144963213
Replicate 20.4268759785273
Replicate 30.76253938909191


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_33052.p1 GENE.R_Transcript_33052~~R_Transcript_33052.p1 ORF type:complete len:775 (+),score=176.21,NT-C2|PF10358.5|9.1e-10 R_Transcript_33052:232-2556(+)
ATGGTTTTAGGTCTTAGGGCCAAAACTAGAAGGGGTCCCAATGTTCAGGTTGAGTACCTCATCCATGTTCAGGAAATCAAGCCTTGGCCACCTACACAATCATTGAAAAATCTTCGCTCTGTCTTGATCCAATGGGAAAACGGGGATCGCAATTCTGGTTCTACTAGCTCTGTGGCTCCTTCTGTCGATGATGGAAAAATCGAGTTCAATGAGTCTTTTAAGCTTCCTGCTGTTTTGTCAAGGGATATGTCTGTCAAAAATGGGGATGTGGATGTGTTTCATAAAAACTTGCTGGAGTTCAACTTGTATGAGCCTCGGAGAGATAAGACATTAAAAGGACAGTTGCTTGGGACAGCCATTGTAGACTTAGCTGACTATGTTGTGATTAACGAAATTACCAATGTAAGTGTTCCCATGAACTGTACGAGGAGCTTCAGGAACACTGCCCAGCCCATTTTGTACCTTAGAATCCAGTCCTATGATAAGGTTCGCTCGAACTCATCATTAAGGGGCAGATTGGCAAAAGAAGCATCCTTGGACAAAAATGGTGGAGACTCAGTTTCAGCTCTGATGAGTGAGGAGTATGCTGATGAAACCGAGGTTGCTTCCTTGGCTGATGACGATGTTTCATCGCACTCCTCGTTGACTGCCTCATCTGCTCATGCATCTAGTGGAGGTTCACCTTCACATAACAAGGAGATTGGCACAGGCAGGGGAAAAGACCTTACAGAGATGGGAACAGACAAACAAGAACTGGACCTAAAGCTGGCTCATCAAAGATCAGATACCAAGATAGTCAAGGAATCAAATGACAATTCGAAGGATGGCTCTTCACTTGGTGCCTCTGTAGAAGTTTCTTCTGATCATAGGAGCCCAAATAATGCACCTGCTTCTTTATCTGACAACTCTGACTTGGAGTCTGAGTCAAATTCAGCAAAATCTTTTGCCTCTGGTCCAGTGAATGTGTCTGGTAATCAAGATACTGAAAGCGATGCTCCAGCTTTGAATCGCAATAGATTCAAACAAGTTAAATCAGTTCGATCCCCGATGGATTCTGCCCGGAGCAATGGCCTTCCGGGTGGTGGTTCTGGAGCTCCAGTGAAGCATGAAGCTAAGATTTATCCAGTAGATAAAGGTAGTGCCTCAGCTAACACTAAAGCTCAAGAGCTCGAACAAAGAATAAAGATGCTAGAGGGAGAATTGAGAGAAGCTGCTGGTATTGAGGTCTCACTATATTCAGTAGTTGCAGAGCATGGTAGCTCTGTAAATAAGGTTCATGCCCCGGCAAGGCGGCTTTCTAGACTGTATTTGCAAGCAAGCAAAGGAATGAGGAGAGCCAATGCAGCGCAAAGCGCAGTTTCAGGACTGGTTGTGGTGGCAAAAGCTTGTGGAAATGATGTCCCTCGGTTGACCTTTTGGTTGTCAAACTGCATTGTTCTCCGAGCAATTGTTAGTGAGGCATTCGTGAATGAGCTGTTGCCAATATCTGCTGGAACTTCATCTGAACATAGTGGAGCCAAGGGAATGAGCAAGAAACCAGCATCACTGAAGTGGAAAGTTACATCTTCTGAAAAGAAAGGAACGAAAGATTTTTTGGGTAGAGGTGTTGAAGATTTGGAAGATCCACATGCATTTATATCTGCATTGGAAAAAGTTGAATCTTGGATCTTTTCACGAATTATCGAATCTGTTTGGTGGCAGACTTTGACTCCACATATGCAATCTTCAGCTGCCAAGGCAATAGATAAAGTGGTTGATTCTGGCACTAAAAGAAACTATAAGAGGACATCCAGTTCTGCTGATCAAGGGCAGGTGAATTTCTCATTAGAGCTTTGGAAGAAGGCATTCAAGGATGCCTGTGAAAGGCTCTGTCCTGTCCGAGCTGGAGGTCATGAGTGTGGCTGTTTGCCAGTTCTGTCTAAATTGGTTAGTTTGATGAGCTTGAATTCTAAGTTTATGAGTGAGCATTTCATGATAATATTTTTTCTTTCTTCTCTTCTTCAATTTGGATATCCAGATAAGCATCTCACATTCCTTTGGGCTGTTACACAAGTAGGTGCTTTAGATGCTCCTTCTCAAGCCTCTAAGGACAAAATGTTTCAATTTCACACTCTTCATATTGATGTGAAGTTCATGATCGACTGTTCGAAGCTACATGCAGAGATCAATAATCAGGCCAATGGTGGGCTTGACACTGAATGTTTAGCTGATCCTCACAGTTTACACAAAATGCCACACATCCTTTTTATGCTGGTGAACCCTTGTCACCAAATATTACTTTTCATCATGTTCACTATACAACAACAAAACAAACGACTAAGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_33052.p1 GENE.R_Transcript_33052~~R_Transcript_33052.p1 ORF type:complete len:775 (+),score=176.21,NT-C2|PF10358.5|9.1e-10 R_Transcript_33052:232-2556(+)
MVLGLRAKTRRGPNVQVEYLIHVQEIKPWPPTQSLKNLRSVLIQWENGDRNSGSTSSVAPSVDDGKIEFNESFKLPAVLSRDMSVKNGDVDVFHKNLLEFNLYEPRRDKTLKGQLLGTAIVDLADYVVINEITNVSVPMNCTRSFRNTAQPILYLRIQSYDKVRSNSSLRGRLAKEASLDKNGGDSVSALMSEEYADETEVASLADDDVSSHSSLTASSAHASSGGSPSHNKEIGTGRGKDLTEMGTDKQELDLKLAHQRSDTKIVKESNDNSKDGSSLGASVEVSSDHRSPNNAPASLSDNSDLESESNSAKSFASGPVNVSGNQDTESDAPALNRNRFKQVKSVRSPMDSARSNGLPGGGSGAPVKHEAKIYPVDKGSASANTKAQELEQRIKMLEGELREAAGIEVSLYSVVAEHGSSVNKVHAPARRLSRLYLQASKGMRRANAAQSAVSGLVVVAKACGNDVPRLTFWLSNCIVLRAIVSEAFVNELLPISAGTSSEHSGAKGMSKKPASLKWKVTSSEKKGTKDFLGRGVEDLEDPHAFISALEKVESWIFSRIIESVWWQTLTPHMQSSAAKAIDKVVDSGTKRNYKRTSSSADQGQVNFSLELWKKAFKDACERLCPVRAGGHECGCLPVLSKLVSLMSLNSKFMSEHFMIIFFLSSLLQFGYPDKHLTFLWAVTQVGALDAPSQASKDKMFQFHTLHIDVKFMIDCSKLHAEINNQANGGLDTECLADPHSLHKMPHILFMLVNPCHQILLFIMFTIQQQNKRLR*

Click here to download the sequence:
Link to NCBI Protein BLAST