Transcript Information: R_Transcript_33065.p1


Annotated TAIR IDAT2G21940.4
Annotated Gene Nameshikimate kinase 1
Annotated Gene Symbol(s)SK1, ATSK1
Annotation TypeOrtholog
Chromosome Positionchr2:9351106-9352881 | Forward length=304
E-Value1.6E-95
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 124.214365710974
Replicate 220.360048888532
Replicate 317.816351463674
Condition 2: 8 Hour
Replicate 117.725457790093
Replicate 221.758568525598
Replicate 325.11889550498
Condition 3: 24 Hour
Replicate 121.721022999949
Replicate 217.599651033895
Replicate 321.887704686897


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_33065.p1 GENE.R_Transcript_33065~~R_Transcript_33065.p1 ORF type:complete len:297 (+),score=49.58,SKI|PF01202.18|2.8e-44,AAA_18|PF13238.2|8.4e-08 R_Transcript_33065:283-1173(+)
ATGGAGGCTAAACTTGTTCAAAGCATTCGGCCTTGTGCTTGGATGGATACACGAAAAATGATGAAAAGTCCCAGTGGGTTGACCTGGGTATCTCCAAGAACTAAGGGAAAACAAGGGATTCAGATAATGGCTATACGATCGAGTAAGAGCTCGGTTTGTCACAAGCCACTTGCTTTAAGGGTTTCATGTTCTTTGAAAAATTCTCAAGGTTCTGTAGTGGATTCTGGTGCCTTTGCTACTTCGCTGAACGAGTCTGTAGTCTTGAAGAATAAGGCACACGATATTGAGCCATATTTAGATGGACGCTGCATATACCTTGTTGGTATGATGGGCTCTGGAAAGACAACGATTGGCAAGATTTTGTCAGAAGCTCTTGATTATTCGTTCTCTGATAGTGATGTTTTTATAGAACAGACAGTTGGTGTGTCTGTCGCAGAAATCTTTAAGCAACATGGAGAAGGTTTTTTCAGAGACAGGGAGACAGAGGCATTGCAGAAGCTATCTTCAATGCGCCAACTAGTTTTTTCCACTGGTGGAGGGGTGGTTATCAGGCCCATCAACTGGAAGCACATGCAAAGCGGTATCAGTGTCTGGCTAGATGTACCAATCGATTGCTTAGCACGGAGAGTTTCAGCTGTAGGAACTGGTTCTCGCCCCTTATTGGACGGTGAATCAGGGGATGCTTACACTAAGGCTTTTAAACGTTTGTCCACACTATTTCAAGAAAGGGGGGAAGCATATGCCAAAGCTAGTACCCGAGTTTCTTTGGAATATTTGTCAGAGAAACTAGGGCATGTAGAGGTAGATAAGCTTACTCCAATCAATATTGCCATTGAGGTGCTTGAACAAATTGAGAGCTTTCTTAAGGAGGATGGCGGCGTTGTTGTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_33065.p1 GENE.R_Transcript_33065~~R_Transcript_33065.p1 ORF type:complete len:297 (+),score=49.58,SKI|PF01202.18|2.8e-44,AAA_18|PF13238.2|8.4e-08 R_Transcript_33065:283-1173(+)
MEAKLVQSIRPCAWMDTRKMMKSPSGLTWVSPRTKGKQGIQIMAIRSSKSSVCHKPLALRVSCSLKNSQGSVVDSGAFATSLNESVVLKNKAHDIEPYLDGRCIYLVGMMGSGKTTIGKILSEALDYSFSDSDVFIEQTVGVSVAEIFKQHGEGFFRDRETEALQKLSSMRQLVFSTGGGVVIRPINWKHMQSGISVWLDVPIDCLARRVSAVGTGSRPLLDGESGDAYTKAFKRLSTLFQERGEAYAKASTRVSLEYLSEKLGHVEVDKLTPINIAIEVLEQIESFLKEDGGVVV*

Click here to download the sequence:
Link to NCBI Protein BLAST