Transcript Information: R_Transcript_33066.p1


Annotated TAIR IDAT2G21940.4
Annotated Gene Nameshikimate kinase 1
Annotated Gene Symbol(s)SK1, ATSK1
Annotation TypeHomolog
Chromosome Positionchr2:9351106-9352881 | Forward length=304
E-Value6E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.8653329080581
Replicate 21.7291070931069
Replicate 31.3474551527148
Condition 2: 8 Hour
Replicate 12.3045519950348
Replicate 20.2630691981316
Replicate 31.7083868819188
Condition 3: 24 Hour
Replicate 13.3761481217212
Replicate 21.4271049870374
Replicate 32.703775284852


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_33066.p1 GENE.R_Transcript_33066~~R_Transcript_33066.p1 ORF type:complete len:170 (+),score=22.29,AAA_18|PF13238.2|5.1e-06 R_Transcript_33066:283-792(+)
ATGGAGGCTAAACTTGTTCAAAGCATTCGGCCTTGTGCTTGGATGGATACACGAAAAATGATGAAAAGTCCCAGTGGGTTGACCTGGGTATCTCCAAGAACTAAGGGAAAACAAGGGATTCAGATAATGGCTATACGATCGAGTAAGAGCTCGGTTTGTCACAAGCCACTTGCTTTAAGGGTTTCATGTTCTTTGAAAAATTCTCAAGGTTCTGTAGTGGATTCTGGTGCCTTTGCTACTTCGCTGAACGAGTCTGTAGTCTTGAAGAATAAGGCACACGATATTGAGCCATATTTAGATGGACGCTGCATATACCTTGTTGGTATGATGGGCTCTGGAAAGACAACGATTGGCAAGATTTTGTCAGAAGCTCTTGATTATTCGTTCTCTGATAGGTTTGTTCTTGGCATTTTATGGATGGTTTCTGGAAGCAATATTATAGTTAGATTTAACCTGACAGGAAAGCCTGCATGTATCTGCCGTTCTGTTTTAGGGATTTGTCGCTATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_33066.p1 GENE.R_Transcript_33066~~R_Transcript_33066.p1 ORF type:complete len:170 (+),score=22.29,AAA_18|PF13238.2|5.1e-06 R_Transcript_33066:283-792(+)
MEAKLVQSIRPCAWMDTRKMMKSPSGLTWVSPRTKGKQGIQIMAIRSSKSSVCHKPLALRVSCSLKNSQGSVVDSGAFATSLNESVVLKNKAHDIEPYLDGRCIYLVGMMGSGKTTIGKILSEALDYSFSDRFVLGILWMVSGSNIIVRFNLTGKPACICRSVLGICRY*

Click here to download the sequence:
Link to NCBI Protein BLAST