Transcript Information: R_Transcript_33069.p1


Annotated TAIR IDAT2G21940.4
Annotated Gene Nameshikimate kinase 1
Annotated Gene Symbol(s)SK1, ATSK1
Annotation TypeHomolog
Chromosome Positionchr2:9351106-9352881 | Forward length=304
E-Value1E-68
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.1623716810468
Replicate 20.95105193523301
Replicate 32.633875751474
Condition 2: 8 Hour
Replicate 13.4979807067493
Replicate 22.7269368099007
Replicate 32.972563411701
Condition 3: 24 Hour
Replicate 12.6397478693876
Replicate 21.4601042471114
Replicate 32.2116496025088


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_33069.p1 GENE.R_Transcript_33069~~R_Transcript_33069.p1 ORF type:complete len:287 (+),score=41.66,SKI|PF01202.18|5.7e-44,AAA_18|PF13238.2|7.7e-08 R_Transcript_33069:283-1143(+)
ATGGAGGCTAAACTTGTTCAAAGCATTCGGCCTTGTGCTTGGATGGATACACGAAAAATGATGAAAAGTCCCAGTGGGTTGACCTGGGTATCTCCAAGAACTAAGGGAAAACAAGGGATTCAGATAATGGCTATACGATCGAGTAAGAGCTCGGTTTGTCACAAGCCACTTGCTTTAAGGGTTTCATGTTCTTTGAAAAATTCTCAAGGTTCTGTAGTGGATTCTGGTGCCTTTGCTACTTCGCTGAACGAGTCTGTAGTCTTGAAGAATAAGGCACACGATATTGAGCCATATTTAGATGGACGCTGCATATACCTTGTTGGTATGATGGGCTCTGGAAAGACAACGATTGGCAAGATTTTGTCAGAAGCTCTTGATTATTCATTCTCTGATAGTGATGTTTTCATAGAGCAGACAGTTGGTGTGTCTGTCGCAGAAATCTTTAAGCAACATGGAGAAGGTTTTTTCAGAGACAGGGAGACAGAGGCATTGCAGAAGCTATCTTCAATGCGCCAACTAGTTGTTTCCACTGGTGGAGGGGCGGTTATCAGGGCCATCAACTGGAAGCACATGCAAAGCGGTATCAGTGTCTGGCTAGATGTACCAATCGATTGCTTAGCACGGAGAGTTTCAGCTGTAGGAACTGGTTCTCGCCCCTTATTGGACGGTGAATCAGGGGATGCTTACACTAAGGCTTTTAAACGTTTGTCCACACTATTTCAAGAAAGGGGGGAAGCATATGCCAAAGCTAGTACCCGAGTTTCTTTGGAATGTATGCTCTTGTTACTTCATGCGTTCATCAAACTCGTTCATTCTCTTCACAATTTTGTGAAGATCACCGTGAATATTAAGATAATCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_33069.p1 GENE.R_Transcript_33069~~R_Transcript_33069.p1 ORF type:complete len:287 (+),score=41.66,SKI|PF01202.18|5.7e-44,AAA_18|PF13238.2|7.7e-08 R_Transcript_33069:283-1143(+)
MEAKLVQSIRPCAWMDTRKMMKSPSGLTWVSPRTKGKQGIQIMAIRSSKSSVCHKPLALRVSCSLKNSQGSVVDSGAFATSLNESVVLKNKAHDIEPYLDGRCIYLVGMMGSGKTTIGKILSEALDYSFSDSDVFIEQTVGVSVAEIFKQHGEGFFRDRETEALQKLSSMRQLVVSTGGGAVIRAINWKHMQSGISVWLDVPIDCLARRVSAVGTGSRPLLDGESGDAYTKAFKRLSTLFQERGEAYAKASTRVSLECMLLLLHAFIKLVHSLHNFVKITVNIKII*

Click here to download the sequence:
Link to NCBI Protein BLAST