Transcript Information: R_Transcript_33075.p1


Annotated TAIR IDAT2G21940.4
Annotated Gene Nameshikimate kinase 1
Annotated Gene Symbol(s)SK1, ATSK1
Annotation TypeHomolog
Chromosome Positionchr2:9351106-9352881 | Forward length=304
E-Value6E-74
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.532612225094
Replicate 212.236697376377
Replicate 311.599271585313
Condition 2: 8 Hour
Replicate 17.8760266231585
Replicate 211.678931917052
Replicate 314.856573023692
Condition 3: 24 Hour
Replicate 113.233640472021
Replicate 211.097869123284
Replicate 313.035034319904


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_33075.p1 GENE.R_Transcript_33075~~R_Transcript_33075.p1 ORF type:complete len:314 (+),score=52.60,SKI|PF01202.18|2.6e-44,AAA_18|PF13238.2|9.4e-08 R_Transcript_33075:363-1304(+)
ATGGAGGCAAAACTTGTTCAAAGCATTCAGCCTTGTGCTTGGATGGATACACGAAAAATGATGAAAAGTCCCAGTGGGTTGACCTGGGTATCTCCAAGAACTAAGGGAAAACAAGGGATTCAGATAATGGCTATACGATCGAGTAAGAGCTCGGTTTGTCACAAGCCACTTGCTTTAAGGGTTTCATGTTCTTTGAAAAATTCTCAAGGTTCTGTAGTGGATTCTGGTGCCTTTGCTACTTCGCTGAACGAGTCTGTAGTCTTGAAGAATAAGGCACACGATATTGAGCCATATTTAGATGGACGCTGCATATACCTTGTTGGTATGATGGGCTCTGGAAAGACAACGATTGGCAAGATTTTGTCAGAAGCTCTTGATTATTCATTCTCTGATAGTGATGTTTTCATAGAGCAGACAGTTGGTGTGTCTGTCGCAGAAATCTTTAAGCAACATGGAGAAGGTTTTTTCAGAGACAGGGAGACAGAGGCATTGCAGAAGCTATCTTCAATGCGCCAACTAGTTGTTTCCACTGGTGGAGGGGCGGTTATCAGGGCCATCAACTGGAAGCACATGCAAAGCGGTATCAGTGTCTGGCTAGATGTACCAATCGATTGCTTAGCACGGAGAGTTTCAGCTGTAGGAACTGGTTCTCGCCCCTTATTGGACGGTGAATCAGGGGATGCTTACACTAAGGCTTTTAAACGTTTGTCCACACTATTTCAAGAAAGGGGGGAAGCATATGCCAAAGCTAGTACCCGAGTTTCTTTGGAATATTTGTCAGAGAAACTAGGGCATGTAGAGGTAGATAAGCTTACTCCAAGCAATATTGTCATTGAGGTAAGTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTCTGCCCCCAAAGTCATGCACGCATCTTATAATTGTAGGACAAATGACTAAGACAGGTGACTCGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_33075.p1 GENE.R_Transcript_33075~~R_Transcript_33075.p1 ORF type:complete len:314 (+),score=52.60,SKI|PF01202.18|2.6e-44,AAA_18|PF13238.2|9.4e-08 R_Transcript_33075:363-1304(+)
MEAKLVQSIQPCAWMDTRKMMKSPSGLTWVSPRTKGKQGIQIMAIRSSKSSVCHKPLALRVSCSLKNSQGSVVDSGAFATSLNESVVLKNKAHDIEPYLDGRCIYLVGMMGSGKTTIGKILSEALDYSFSDSDVFIEQTVGVSVAEIFKQHGEGFFRDRETEALQKLSSMRQLVVSTGGGAVIRAINWKHMQSGISVWLDVPIDCLARRVSAVGTGSRPLLDGESGDAYTKAFKRLSTLFQERGEAYAKASTRVSLEYLSEKLGHVEVDKLTPSNIVIEVSFSLSLSLSLSPLPPKSCTHLIIVGQMTKTGDS*

Click here to download the sequence:
Link to NCBI Protein BLAST