Transcript Information: R_Transcript_330792.p1


Annotated TAIR IDAT3G09040.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:2761195-2764281 | Reverse length=1028
E-Value7E-27
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.22139486971471
Replicate 30
Condition 3: 24 Hour
Replicate 10.45461004411295
Replicate 20
Replicate 30.21670994739502


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_330792.p1 GENE.R_Transcript_330792~~R_Transcript_330792.p1 ORF type:internal len:101 (+),score=19.45,PPR|PF01535.16|0.00099,PPR|PF01535.16|1.6e-06,PPR|PF01535.16|4.3e+02,PPR_2|PF13041.2|0.0014,PPR_2|PF13041.2|2.5e-06,PPR_3|PF13812.2|0.055,PPR_3|PF13812.2|0.035,PPR_3|PF13812.2|2.3e+02,PPR_1|PF12854.3|0.056,PPR_1|PF12854.3|0.00072 R_Transcript_330792:1-300(+)
AACTTGTTTGTAAGTAATGCATTAGTTGATATGTACGCAAAATCTGGTGCTTTATCTGAAGCAAGGCAACTAATTGAGAATATGATCGATAGAGATAATGTTTCTTGGAATGCAATCATCGTTGGTCATGTTCAGGAAGGAGAGGAGGATGAGGCTTTTGGCCTCTTTCAGAGAATGATGTCTGACGTTACTACAGCTGATGAAGTCGCTTTGGCTAGTATACTCAGTGCTTGTGCAAATTCGAAAGATCTTATTCGAGGGCAACAAATCCATTGCCTATCTGTAAAACATGGCTTAGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_330792.p1 GENE.R_Transcript_330792~~R_Transcript_330792.p1 ORF type:internal len:101 (+),score=19.45,PPR|PF01535.16|0.00099,PPR|PF01535.16|1.6e-06,PPR|PF01535.16|4.3e+02,PPR_2|PF13041.2|0.0014,PPR_2|PF13041.2|2.5e-06,PPR_3|PF13812.2|0.055,PPR_3|PF13812.2|0.035,PPR_3|PF13812.2|2.3e+02,PPR_1|PF12854.3|0.056,PPR_1|PF12854.3|0.00072 R_Transcript_330792:1-300(+)
NLFVSNALVDMYAKSGALSEARQLIENMIDRDNVSWNAIIVGHVQEGEEDEAFGLFQRMMSDVTTADEVALASILSACANSKDLIRGQQIHCLSVKHGLE

Click here to download the sequence:
Link to NCBI Protein BLAST