Transcript Information: R_Transcript_330896.p1


Annotated TAIR IDAT4G30150.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Nucleolar 27S pre-rRNA processing, Urb2/Npa2 (InterPro:IPR018849); Has 58 Blast hits to 49 proteins in 21 species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 0; Plants - 44; Viruses - 3; Other Eukaryotes - 7 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:14742452-14749764 | Forward length=2009
E-Value3E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.5544020291203
Replicate 30.30002662182458
Condition 3: 24 Hour
Replicate 10
Replicate 20.54682460059283
Replicate 30.18089012137932


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_330896.p1 GENE.R_Transcript_330896~~R_Transcript_330896.p1 ORF type:internal len:121 (+),score=16.04 R_Transcript_330896:1-360(+)
TTGAAATCAGTTTACTTGGTGGTTGCATGGTGGAGCCCCTTGTCATCAGAACATAGTGGTGAAGTGAATGATATGATCTTCTCTCTGATGGATCACACATCCTATATGTTTTTCACACTAGGCAAGCATCAATTTAGTTTGGCACTTAAATCCGTTTTGAGCCCTAAGAGTATTAAAAATTCTTCTTTGCTCTGTGGAGGGGATCATTCAAATGAATCCAATAGTTGCGTAAAATTATCGAAACATGTTGGAACTAGTAAAACTGTCACCACTACAGTTGAGATGTTGGAGGATCAGATAAAAAGCAGCCTGCTCTCTCTGAGCGACGCGTTTAGTAATGGTAATGCTGAGCTGCGTGTA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_330896.p1 GENE.R_Transcript_330896~~R_Transcript_330896.p1 ORF type:internal len:121 (+),score=16.04 R_Transcript_330896:1-360(+)
LKSVYLVVAWWSPLSSEHSGEVNDMIFSLMDHTSYMFFTLGKHQFSLALKSVLSPKSIKNSSLLCGGDHSNESNSCVKLSKHVGTSKTVTTTVEMLEDQIKSSLLSLSDAFSNGNAELRV

Click here to download the sequence:
Link to NCBI Protein BLAST