Transcript Information: R_Transcript_330897.p1


Annotated TAIR IDAT4G30150.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Nucleolar 27S pre-rRNA processing, Urb2/Npa2 (InterPro:IPR018849); Has 58 Blast hits to 49 proteins in 21 species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 0; Plants - 44; Viruses - 3; Other Eukaryotes - 7 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:14742452-14749764 | Forward length=2009
E-Value1E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.32306125583573
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.65006721098881
Replicate 20
Replicate 30.32126744460862
Condition 3: 24 Hour
Replicate 10.2031664356434
Replicate 20
Replicate 30.19369650165396


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_330897.p1 GENE.R_Transcript_330897~~R_Transcript_330897.p1 ORF type:internal len:113 (-),score=14.36 R_Transcript_330897:3-338(-)
GATCATTCAAATGAATCCAATAGTTGCGTAAAATTATCGAAACATGTTGGAACTAGTAAAACTGTCACCACTACAGTTGAGATGTTGGAGGATCAGATAAAAAGCAGCCTCCTCTCTCTGAGCGACGCGTTTAATAATGGTAATGCTGAGCTTCGTGTACAACTAGCAGATTTGAACAAATTATCGTCTGTAGTTTCTTGCATTCAAGGTTTTCTATGGGGATCGGAGTCTGCTCTTTGTGATCTAAATGCAAGTGGTAATGATTTGAAAGCAAAAATGAGAAAGTGTAAACATAAGACAATATTAGGAATAAAAAGTCTTGTTGAGATATTTGTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_330897.p1 GENE.R_Transcript_330897~~R_Transcript_330897.p1 ORF type:internal len:113 (-),score=14.36 R_Transcript_330897:3-338(-)
DHSNESNSCVKLSKHVGTSKTVTTTVEMLEDQIKSSLLSLSDAFNNGNAELRVQLADLNKLSSVVSCIQGFLWGSESALCDLNASGNDLKAKMRKCKHKTILGIKSLVEIFV

Click here to download the sequence:
Link to NCBI Protein BLAST