Transcript Information: R_Transcript_33100.p1


Annotated TAIR IDAT1G58450.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)TPR6
Annotation TypeHomolog
Chromosome Positionchr1:21718014-21718916 | Forward length=164
E-Value5E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.946111370721
Replicate 25.3598150851731
Replicate 38.4088024087142
Condition 2: 8 Hour
Replicate 15.6307157790079
Replicate 27.9725506986506
Replicate 39.6502233678007
Condition 3: 24 Hour
Replicate 15.0855902086686
Replicate 25.4905496816205
Replicate 313.345035136104


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_33100.p1 GENE.R_Transcript_33100~~R_Transcript_33100.p1 ORF type:complete len:474 (+),score=79.49,TPR_11|PF13414.2|9.5e-10,TPR_11|PF13414.2|0.00079,TPR_11|PF13414.2|1.9,TPR_1|PF00515.24|1,TPR_1|PF00515.24|0.03,TPR_1|PF00515.24|0.041,TPR_2|PF07719.13|4.7,TPR_2|PF07719.13|0.3,TPR_2|PF07719.13|0.028 R_Transcript_33100:75-1496(+)
ATGTATACCTTGAAATTCAAAGAGAAAGGGAACTTTTATTATGGGCGAAAGGATTTTGTCAATGCTATTATATGTTACGCGAAAGCTTCTGATATTTTTTCAATTGCTTTCTCTTTGAAAATTGAGGATGAGAGGTTGTTTAGAGAACTGGATGTGCAATTGAATCTTAATTTAGCTGCCTGCTCCTTGAAATTACATGATAATGAGGATGCGGTGAACTACTGCTCGTTGGTGTTAAAAATTGATCCTCTCAATGTTAAGGCTTTTTTTAGAAGGGCTATGGCACTGGTGAATCTAGGTCGTTTATTAGAGGCACATTCAGATTTGATAATGGCTCTGAAGTTGGAACCAGAAAACAAGGAAATCAAAAGGGAATTAGCAAGTGCTGAAGAATCCCTAAACTCTTCACAAAGTCAGAATGGATCACAGGGTCTAGCAGGAGCCAGTGTTTTAAGAGATTATAAGAAGAGGAAAAATTGCAAAAAACAGTTGAATTTGGAGGATACATTGCATAAGCCACTGAGAACAGAAGTTATGACTAATTTTGACCACAACATGGAGAGTAATCAAGGCCCCATAGGTTCGAATCTGACTGAAAGTGATTCAACTTCGGTTTCTTCTAATTCTATTTGTGAAATGTCGGACCAATGTGGTCCTAGTTGTTTGGGTCCTGACAATTGTGTTGAGCTGCCAGTTGTCAGTGATAAGGCAATTGCAGAGTCCACTTGCCGGTTTGTTAACCGACGTAGAAAGGACTTCTCGTTCAAAATTTCTGCAGCTCAGTATAATCAACTTCTTGTGGGTAAGGAGGCTTGTTTTTATCACCATGTTCTTAAAACTGTGTTGAAGGTTCGAGTTTTAAGGACAAAGTCCAAGTTTCCAGAGGAAAGGGAACGGTCTAGTGTTTCTAATGGTGAGAGTATGAAGGAGAATTTCAAGGATGGTAAAATTAGGGATACAATACCCCATTCTGTGCAAGCATCCTCCATCAAAGCTGATTGTAAGGTTGTTGATTGTATGGATGAAGACCTGGTGACACTGAAGGATGGTGTTCATAGGAATGTTAACAATCAGTGTTATTCAAAGTCTCATGAAACCTTGTTCATGTTCTCCTCTCAACCTAAGGCGCGAAAGAGGTCCTCTACATTATCAGCGACAGGGTTGGATTCTCCTTTACGTGGCAAGAGACTTCGCAACCAACAAGGGCTGAGCAAGATTTTTCCAAGTGAAAGAAGTTTCATCTCCAACAATAGCTGTCCTTGCAGGTACCATTGTGGACGAAAGCGGAAGCAATCTACAGCAAGACTAGATCAATATACTACCCATTCCAAGAAGAAGATAGCCTTTAGTTCTTCTTTTCATATAAATAATATGATGCCATGTTTTTTAAATGTAGCGGAGGACACACATTCTTGCAGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_33100.p1 GENE.R_Transcript_33100~~R_Transcript_33100.p1 ORF type:complete len:474 (+),score=79.49,TPR_11|PF13414.2|9.5e-10,TPR_11|PF13414.2|0.00079,TPR_11|PF13414.2|1.9,TPR_1|PF00515.24|1,TPR_1|PF00515.24|0.03,TPR_1|PF00515.24|0.041,TPR_2|PF07719.13|4.7,TPR_2|PF07719.13|0.3,TPR_2|PF07719.13|0.028 R_Transcript_33100:75-1496(+)
MYTLKFKEKGNFYYGRKDFVNAIICYAKASDIFSIAFSLKIEDERLFRELDVQLNLNLAACSLKLHDNEDAVNYCSLVLKIDPLNVKAFFRRAMALVNLGRLLEAHSDLIMALKLEPENKEIKRELASAEESLNSSQSQNGSQGLAGASVLRDYKKRKNCKKQLNLEDTLHKPLRTEVMTNFDHNMESNQGPIGSNLTESDSTSVSSNSICEMSDQCGPSCLGPDNCVELPVVSDKAIAESTCRFVNRRRKDFSFKISAAQYNQLLVGKEACFYHHVLKTVLKVRVLRTKSKFPEERERSSVSNGESMKENFKDGKIRDTIPHSVQASSIKADCKVVDCMDEDLVTLKDGVHRNVNNQCYSKSHETLFMFSSQPKARKRSSTLSATGLDSPLRGKRLRNQQGLSKIFPSERSFISNNSCPCRYHCGRKRKQSTARLDQYTTHSKKKIAFSSSFHINNMMPCFLNVAEDTHSCS*

Click here to download the sequence:
Link to NCBI Protein BLAST