Transcript Information: R_Transcript_331052.p2


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value8E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.77672174275399
Replicate 20.8934595921829
Replicate 30.64983652755042
Condition 2: 8 Hour
Replicate 10.34731723329426
Replicate 20.79293907238247
Replicate 31.0298786167595
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.15523194813402


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_331052.p2 GENE.R_Transcript_331052~~R_Transcript_331052.p2 ORF type:3prime_partial len:141 (+),score=16.77,gag_pre-integrs|PF13976.2|6.5e-12,rve|PF00665.22|6.1e-07 R_Transcript_331052:1388-1807(+)
ATGAAGAAGGAGATTGGTCGGGGCCATGAAAGAGGTGGACTTTATTTCCTTGATGCATCGAATACATGTGCTGCTGGTCTCCTAGCTCCTTCTTTTGCTACTTGGCATGCTCGTTTTGGCCACCCATCATCCACTATTCTTAAAACTTTAGCTCCAACCCTTGGTTTTAATAATGAAATTCATGAACTTTGTGAAATTTGTCATTTGTCCAAACAAACAAGACTCCCCTTTCCATTACGTAATTCAATTACTAATAATCCCTTTGATATAATTCATGTTGATGTTTGGGGCAAATACGCTACACCTACAAGAAATGGTCATTGTTATTTTCTTACTCTTGTTGACGATTTTTCTCGTGTTACTTGGACTTATCTCATGAAATTTAAATCTGATGCATACTCATTTTTAGTATATTTTTTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_331052.p2 GENE.R_Transcript_331052~~R_Transcript_331052.p2 ORF type:3prime_partial len:141 (+),score=16.77,gag_pre-integrs|PF13976.2|6.5e-12,rve|PF00665.22|6.1e-07 R_Transcript_331052:1388-1807(+)
MKKEIGRGHERGGLYFLDASNTCAAGLLAPSFATWHARFGHPSSTILKTLAPTLGFNNEIHELCEICHLSKQTRLPFPLRNSITNNPFDIIHVDVWGKYATPTRNGHCYFLTLVDDFSRVTWTYLMKFKSDAYSFLVYFL

Click here to download the sequence:
Link to NCBI Protein BLAST