Transcript Information: R_Transcript_3312.p1


Annotated TAIR IDAT5G11780.1
Annotated Gene Nameunknown protein; Has 37 Blast hits to 37 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:3793928-3795983 | Forward length=504
E-Value4E-63
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.7919530121668
Replicate 26.9623148949877
Replicate 37.9537283319974
Condition 2: 8 Hour
Replicate 17.6943429782142
Replicate 29.317034100494
Replicate 311.187190573329
Condition 3: 24 Hour
Replicate 113.192767695087
Replicate 29.7257565246643
Replicate 316.719774413602


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_3312.p1 GENE.R_Transcript_3312~~R_Transcript_3312.p1 ORF type:complete len:576 (+),score=101.29 R_Transcript_3312:119-1729(+)
ATGGCTTCAACTACAACTACCACTACAAACCCCTCAAAACCTAGTACAATAATTCAATCTTTCCCAACTCAACCATACCAACCCATGTTACAAGAGTCAGTTCACCATTTCCTGACCCAACTTCAAGCTGGAATTTCTGATTTTACCCACTTCAATTTGATGTTCTCTCGTTTAATCCAAACCATGCCTTCCCCACCAATTGAGGTTATTTGGTTCTATACAGCTGTAAATTTCCATACCCACAAAAATATGACTCATAAAGATGATAACTTTGGTATTGTTTCATGTCTTAAGGAGCTTTTTCAGTTGCTTGTTTCTTGTTCTGGTCCTTGTAGTAGTAGCCTTAAAAGGGTTGCTCTTTTGGCCCCTTTAGTGTTTGAGTTGTGTAATTTTGTAAGTGATTTGAAAGTACAAAGTGAAAGTGGGTTTTTGAGGTATGATAATGTGGTTGTTGTTGTGAAAGAAGTGGGTTGTTTAGTGGAGGGTTTAGTGAGTTTTATCAGTTTGTGTTGTTGTGAAGGGGTGGATGATCATGATGACTCTTTACCCTTTTCGCCGTGCTTTGTGGATTTGGTTAAAGTTTGGACCGTTCGAAGGTGGGAGAGAGAGTTCGGGTTTGATGATGATTTTAGGATATTTTTCCCTATGGTTAATGATGAGGTTCGTAACAGCCTTCTTGCTGGTGATGTTAATGGGGTTGGTTTTCTAGCTGGGGTTGTTATGTGCCAGGCCTTTTTGCTTAGTCTTTGCTTCAAGTTTGGCCTGGAGGAACCACAAATGAAACAGGATGATGATGTTCGGAATTTAGCGGTTAATACCATCACTGGATTTCGGAGTTGTTACTTCTTTGATATTCTTCTGAAGGTGCTATTGGACTCAAGCTTGCCGGTCACCTCCCTGATGAGTTGTGTCGAAGAAGTGCAGTTGCGAGAAGTCCTTTTTGATGCTATCATCTTGGTTGATTATCCGTTTTTCAATCCTGGATGTGGGATTCATCTTTGCAGTCTTCACTTAAACAGTCTTGCTTCGACATGGTTGTTTGTTGCAGACAAAGCCATGCAGTTTGTTAGGAATAATGGTGACCAAACTAGAGTCATCAGTTACACGAAAGCTTTCTCTAAATCTTTCATAAACTCTCGGTTATTGAGGTGGGTCTCTGATCAAATTGGTATGGCGGAGGATGCATTGAGACCAAATTTATCAACTCCAGCAGCTTTTGTTGATTGGCTTGTACAACTTAGAAGTCAAGCTTCAGTGAGGTTGAATAGCGAGTTTGCAATGCTGCTTGAAAAGGCATTGCACTGCAAATCTGAGATGACGTGTGAGCAGCCATTCTCACAAGCAGAAGGCAATAACAAGGACTGCAATGTTGACCAAAATGCGGGTGAAGGATGTGGAGTTCATGGAAATACTGAAATGATCGAAGACACAGATGGTACAGTTTCTGGGTGCAATGCTAATTTTGCTGCTATTGATGGCTGCAGAAAGCGTAAAGTAGGAAACAGTGAAGGTGGCATACGGGTTAAGCTACTCAAATATCACACTCAGGGCAGCCCAATCAAGAACTTCTCTCCTTTTCAAAATGAAGTTGGTTTGATTAGAAGAAACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_3312.p1 GENE.R_Transcript_3312~~R_Transcript_3312.p1 ORF type:complete len:576 (+),score=101.29 R_Transcript_3312:119-1729(+)
MASTTTTTTNPSKPSTIIQSFPTQPYQPMLQESVHHFLTQLQAGISDFTHFNLMFSRLIQTMPSPPIEVIWFYTAVNFHTHKNMTHKDDNFGIVSCLKELFQLLVSCSGPCSSSLKRVALLAPLVFELCNFVSDLKVQSESGFLRYDNVVVVVKEVGCLVEGLVSFISLCCCEGVDDHDDSLPFSPCFVDLVKVWTVRRWEREFGFDDDFRIFFPMVNDEVRNSLLAGDVNGVGFLAGVVMCQAFLLSLCFKFGLEEPQMKQDDDVRNLAVNTITGFRSCYFFDILLKVLLDSSLPVTSLMSCVEEVQLREVLFDAIILVDYPFFNPGCGIHLCSLHLNSLASTWLFVADKAMQFVRNNGDQTRVISYTKAFSKSFINSRLLRWVSDQIGMAEDALRPNLSTPAAFVDWLVQLRSQASVRLNSEFAMLLEKALHCKSEMTCEQPFSQAEGNNKDCNVDQNAGEGCGVHGNTEMIEDTDGTVSGCNANFAAIDGCRKRKVGNSEGGIRVKLLKYHTQGSPIKNFSPFQNEVGLIRRN*

Click here to download the sequence:
Link to NCBI Protein BLAST