Transcript Information: R_Transcript_33133.p1


Annotated TAIR IDAT3G22380.2
Annotated Gene Nametime for coffee
Annotated Gene Symbol(s)TIC
Annotation TypeOrtholog
Chromosome Positionchr3:7913181-7918967 | Forward length=1555
E-Value4.5E-307
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 127.666715635966
Replicate 216.357287309791
Replicate 322.435291422866
Condition 2: 8 Hour
Replicate 120.810020814729
Replicate 224.120515400117
Replicate 326.996675117609
Condition 3: 24 Hour
Replicate 128.780640901075
Replicate 220.73354543406
Replicate 327.266886347237


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_33133.p1 GENE.R_Transcript_33133~~R_Transcript_33133.p1 ORF type:complete len:1652 (+),score=446.02 R_Transcript_33133:260-5215(+)
ATGATGGACAGAAATAGAGAAGCTCGAAGAGCGGCGGCTATGGCGAATGGCTTGCCTAGAAGAAGACACAGAACCACCACCGGAAGTCTTAGGGACTCACCAGAGGATGACGGTCCAATGGAATTACAAGAGACGGCTCGATTGAGAGATCGGACGGCGAAGAAAGACAGGTCTCGAGAAATAAGAGACCGAGACCGTGACCGTGACCGCGATAGAGAACGCGACCGTGACCGAGAACGTGACCGGGACCGAGACCGGGAGAGAGAAAGGCTGAGCAGGAGTAAGAGGCGGAGAGGGGTAGATAAGTATATGCACGGGAGTAATAGAGAAGATGGTGGTGGTGGTGTTGATGACAGCTCAGAAGAGAGCGTAAATGAAGAAGAAGATGATGACGGACCTGTTCGTTACAACGTTCCGACGACGTCATCGAATCCTGTCCCCATGTCATCCTCTTCACCAGCTTCCTCTACTCTTACTAGTCACCGGAAAAGCTACCCGCCTCCGACGAAGGTCTTTCGGACTTCCACTGCTCCCACTTGGAAGGCTCCTGATGAAATGATCGGTGTTTCCGTCCCTCGGAAGGCCCGCTCTGCGTCGACGAAGAGGTCGCATGATTGTTGGAGCTCCGGAGGTGGTGGTGGTGTAGTGGGAGGAGAGCAGCTTCACAGACAAGCCTCATCGTCGCCGGTGAGGTCAACGATGGCGGCAGCAGTGGTAGGACCACCCCCAGCTCCACCGCCAGTTCCTTCATCAATACCAGCTCCGATGTCACCGTCATCATCAAATGTCTCAATCAAGAAGAAAATTAAGCCAAACTGCCCAAAACAGAAGCCCCCGAAGTCGTCTTCGTCGTGTCCGAAATCATCACCGTCACCGTCGTCGATACAGGACGAGATTGAGATCGAGGTTGCCGAGGTGTTATATGGGTTGATGAGACAATCCCAAGCCCCTTGTTCATCCAAGCAAGAGGGTTTGTTGTCCAATGATTTAGCCACCAGAGATATCAACAGATCTACCGGTGATTCGAAATCTCGAGTTTCATCTCCGATCTCTGCTCCTCCCCAGAATACCACCTCTTCAGCTTCTCCTTTCACCACCGTTGCTCCGAAGAGAAAACGGCCACGCCCGTACCCGGATGAAAATCCTCGGAGCAGCCCCATTCCGAAACCGGAAACAGATCAACCCGTCAAACCAGAGGCACCGTTGCCGGGATCTGCGGTGGAAAACGGCGATTTGCTGAAGTCCAATGATCCCACTCCACCTTTAGAACCGGTGGCGAACGGTGTAAGTTCATCGGATGTGAAACCGATGGTAATGGAAGAATCAGTGGGAATGGTTGTGAGAGGTGCTAAAGTGGAGGAAGCTTCGTCCTCATCCCCTAATATGTTATCACAGGATCACCATCGTGTGGAATCCGCATCTACATCCACTAAACCAACCTCAACTCTTGGTGGTGAGAAGGAGACGCATAGAGAAGAGAAGTTCGAGATAGATCTCATGGCGCCACCACCGCAGTCAAGGGGGTCGCCGGAGAGAGGGGAGGCGGAGTACGGAGGAGTTGGAGGGGGAATGAATATGATGGGAGAAGATGAGAAAGCTATGGTCACGGATAGGGAGGCGGAAGGAAAGGCAAAGGGGGTAGGAAGGGCAAATGAGGAAGGCGATGGTAAAGCAGTAGTAGTGAATGTGAACTCTGCTTCTTCTGCTGAGCCTGAGACTCAGACTCAAGCTGAGCCCAAGTCTAAGGCTAAGGCTAATGGTGCTGTTGTTGTGGGCCCAGAAAGTGAGCCCCACAAGCAGCCGTCACTGCCACCTCAGCATCAACATCACCAGCTCAATCTTAATGACCAGAACAAGGAGAGAAACATTGATTTGCAGCTTGATCTTGAGAAGTCTGATCGTCCCTCTGGTGTGAACGACACCAAGTTGAACCTGCACAAACATCCACCGCCTAAACCCTCCAAAGATGACGCTCTTGCTGACATCAAACCTGGAGGAGGTCAAGCAAGCTCAGTGCCATTGGCAATGTCAGTTCCTGGAGGATGGCCTGGAGGTCTTGGACCCATGGGATATATGGCGCCATTACAAGGAGTGGTTTCAATGGATGCAAGTACAATGGCTTCTCCATCTATGCAGCATCCCCATTTCATGTTCTCACAGCCGAAGCCAAAGAGGTGTGCAACTCACTGCTACATAGCAAGGAGCATATCAGCTCACCAGCAAATGATGAAGATGAACCCCTTTTGGCCTGCACCTGGTTCTGCCCCTCTCTATGGTGCCAAGCCTCCTTACAATCTCAACATGGTTCCTCCTGCTGATTTGCATGCTGCTGCTACTGCTACTGCCAGAGGAACTGTTGTTAACTCTGCCCAAGATAATACTAATAAAGCTGGTGGTCAACCTTTTGCTTTCTTCCCTGGTCAGCCTGCTTCCAAGGACAAATCTCCTCAGCCAGCCATTGCCCCTGATTCTGCCCAGAAAAAGCAGCAGTTCCTTCTTCCCCAGAGCTTACCTCCTGGCACTCCCAGCAATGTTTTGCATGCCCCTGCCTTCTTCTTCCCATTTGGGCAACAACAGCCAGCAGCAGCAGCAGCAGCTGCCCGTCTCGGCTCTGGGAAATCTCCATCAACAGGTGGTAGTGCGGCGGTGTCAACAGCCACAACTACCGCAGCTCCGATGGGGAGTTCGTCCACCCCAACACCGGCTGTTGGTCCGGCAATGAGCTTCAGTTATCCAAACATGGCTGGGAATGAGGCTCAGTTCATGGCAATTTTGGGGAATGGAGCATACCCCTTCCCCATTCCGGCACATGTTGGAGCTGCACCACCTTACAGAGGATCCCATCCTCAGGCAATGTCTTTCTTCAATGGCTCGTTCTACTCATCCCAGATGCTACACCCTTCACAATTACAGCAACAGCAACAACAGCAATCGGCAGCACCCTCTCAGTCTTTGCAGATCCAACAGCAGCAAAGTCATCAGAATCCGAGCCTTTCTACTGCTTCCTCGTCTTCCCAGAAGCAGCAGCATTTACAGAACCAGCAACAGAGGCCCCAAGGAAGCAGTGCTAATGGTGGTACCGGGACCTCAAATCAAAGCATGCAGAATTTTCAAGGTGCTAAAGGTCGGACATCCCATGATATGGGGGGTGAGGACAGCCCTTCAACTGCAGACAGCCGTAACCGACCTAATCTTGGTGTCTATGGCCAGAACTTCGCCATGCCTTTCCATCATCCGAATTTTGCTTTGATGACTCCGCCTTCCTCCCTTGGCCCTGGTGTTGCCAGTGCTGCTAGTGGTGGTAATCATGGTGATAATAAGAAGCAACAGCAGCAACAACAGCAACAATCTCAACAACAGCCTTTTCCTATGTCTTTTGCTTCCATTAATGGTTCTACCACTCCTGGGGGGGCCCTCGACATATCTTCAATGGCTCACAATCATGCTATTATCCAGAGCCTTCCAGAGGCTGCTCGACAGAATTATCAGATGATGGCTGCTGCCGCACAAGCTGCACAAGCAGCCCAACAGAAAAAGAACAACTACCGTGGTCCGGAGGATGTGAAAACTGGTGCTGGTTCTGACTCTTCCAATGCTGAAGAGGAGAGGAAGGTCATGGGTTCAAGAGCTTCTGCAGCCTCTGTTGGACAATCAATTGCTTTCTCAAGGGATTTGGCCAATAACTCGATACCTGGGAGCAATGTGGTTGATAGTTCTGCTAGGAGTCTTAACCTTGTGCCGGGTTCTTCCAGGCCCGCTCGTTCTTCAGGGCCAAACTCAATGTCGAATCCGAATGTTTCCGCTTCCCAGCAGCTTCAGCAGCAACAGCAGCAAATGCTGTTTCCTAAACAGCAACAGTTTGGAGCTGCCACAGTTGCTGCTGCCCGGAACAAGACTCCTGCCACAAGTAATGGGAGTGTTTTCCCTGATCATCTCACATCATCATCTGTCATGGCTGCCAAGTTCCCAAATGCTTTGCCCAGTTTCCCACCTTTGGTACAGAGCAGTGGTGGTGCCCCTTCTCAGTCTACTCAGTGGAAGAATTCTGTCAGGCCAAACACGACAACACAAGTGTCGTCCCCATCCATAGCAACTTCCGCTGCTTCTACCATCAAGAACCTCTCTCAGCAGCAAGGCAGGCCTCAACAGAGTCATACCCAGATCTCATTTGGACCTGCCCCCACCAACCCTAAGCCATCCACCCCTTCACAAGGGCAGCAAGGCCAGAATAGTAACCAAGCCCCTTCTCAGCCGATGATAGTCGGTTCTCCTTCAACATCTTCAGTATCAAAGAATGCCTGTGGAAGCCCAAGGACGACTGCGACAAGTGCATCAGCGGGCAACAAATCAGGGGCTCAAGGTTCTACATTGTCAAGTCAGCAAGGCAAGAATTCACCATCTCCATCTTTATCAAGTCAGAAGCCTTCTATCCTTGGTAGCCCACATATGATGTCAACCTCCAGCTCAGTTAGCAAGCCTCAATTGCCGGAGTCAATGCAGCAGCAACCACTGCTGTCAAAGCAAAACATACAGCAAGCGCAGTTGTTCTTCTCAAACTACATGCAGCAAGCTTCGGCTAATGCATCAGCCGGGGGTGGGTATTATCTCCAGAGGCATAAACCCGACAATCAACAGCAGCAACAACAGGGACAGAAATCTCAAGGATCGGGTGTGCCAACTTCATCGAGTGGGATGTTGTCATTGTGTACTCCTGTTTCTCTAGCAAACGCCAGCACATCGGATCCTGCTAAAGCGGTGGCTGCTGCGGCCGCTGCAGCAGCTGCAGCTAACGGTATGAAAGGTGGTCTTCCACCGCAGGGCATATTCCATGCAGCTCAGTTTGCTCAGTCAGCCGGTGGTTCACATCAGCTGGCGCCTGCAGGTTTCCCGTATGTTCATGCTGTGCCCACTGTCCAGGTGAAACCGGCAGAGCAGAAGCAACCTGCTGGTGAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_33133.p1 GENE.R_Transcript_33133~~R_Transcript_33133.p1 ORF type:complete len:1652 (+),score=446.02 R_Transcript_33133:260-5215(+)
MMDRNREARRAAAMANGLPRRRHRTTTGSLRDSPEDDGPMELQETARLRDRTAKKDRSREIRDRDRDRDRDRERDRDRERDRDRDRERERLSRSKRRRGVDKYMHGSNREDGGGGVDDSSEESVNEEEDDDGPVRYNVPTTSSNPVPMSSSSPASSTLTSHRKSYPPPTKVFRTSTAPTWKAPDEMIGVSVPRKARSASTKRSHDCWSSGGGGGVVGGEQLHRQASSSPVRSTMAAAVVGPPPAPPPVPSSIPAPMSPSSSNVSIKKKIKPNCPKQKPPKSSSSCPKSSPSPSSIQDEIEIEVAEVLYGLMRQSQAPCSSKQEGLLSNDLATRDINRSTGDSKSRVSSPISAPPQNTTSSASPFTTVAPKRKRPRPYPDENPRSSPIPKPETDQPVKPEAPLPGSAVENGDLLKSNDPTPPLEPVANGVSSSDVKPMVMEESVGMVVRGAKVEEASSSSPNMLSQDHHRVESASTSTKPTSTLGGEKETHREEKFEIDLMAPPPQSRGSPERGEAEYGGVGGGMNMMGEDEKAMVTDREAEGKAKGVGRANEEGDGKAVVVNVNSASSAEPETQTQAEPKSKAKANGAVVVGPESEPHKQPSLPPQHQHHQLNLNDQNKERNIDLQLDLEKSDRPSGVNDTKLNLHKHPPPKPSKDDALADIKPGGGQASSVPLAMSVPGGWPGGLGPMGYMAPLQGVVSMDASTMASPSMQHPHFMFSQPKPKRCATHCYIARSISAHQQMMKMNPFWPAPGSAPLYGAKPPYNLNMVPPADLHAAATATARGTVVNSAQDNTNKAGGQPFAFFPGQPASKDKSPQPAIAPDSAQKKQQFLLPQSLPPGTPSNVLHAPAFFFPFGQQQPAAAAAAARLGSGKSPSTGGSAAVSTATTTAAPMGSSSTPTPAVGPAMSFSYPNMAGNEAQFMAILGNGAYPFPIPAHVGAAPPYRGSHPQAMSFFNGSFYSSQMLHPSQLQQQQQQQSAAPSQSLQIQQQQSHQNPSLSTASSSSQKQQHLQNQQQRPQGSSANGGTGTSNQSMQNFQGAKGRTSHDMGGEDSPSTADSRNRPNLGVYGQNFAMPFHHPNFALMTPPSSLGPGVASAASGGNHGDNKKQQQQQQQQSQQQPFPMSFASINGSTTPGGALDISSMAHNHAIIQSLPEAARQNYQMMAAAAQAAQAAQQKKNNYRGPEDVKTGAGSDSSNAEEERKVMGSRASAASVGQSIAFSRDLANNSIPGSNVVDSSARSLNLVPGSSRPARSSGPNSMSNPNVSASQQLQQQQQQMLFPKQQQFGAATVAAARNKTPATSNGSVFPDHLTSSSVMAAKFPNALPSFPPLVQSSGGAPSQSTQWKNSVRPNTTTQVSSPSIATSAASTIKNLSQQQGRPQQSHTQISFGPAPTNPKPSTPSQGQQGQNSNQAPSQPMIVGSPSTSSVSKNACGSPRTTATSASAGNKSGAQGSTLSSQQGKNSPSPSLSSQKPSILGSPHMMSTSSSVSKPQLPESMQQQPLLSKQNIQQAQLFFSNYMQQASANASAGGGYYLQRHKPDNQQQQQQGQKSQGSGVPTSSSGMLSLCTPVSLANASTSDPAKAVAAAAAAAAAANGMKGGLPPQGIFHAAQFAQSAGGSHQLAPAGFPYVHAVPTVQVKPAEQKQPAGE*

Click here to download the sequence:
Link to NCBI Protein BLAST