Transcript Information: R_Transcript_3319.p1


Annotated TAIR IDAT1G08540.1
Annotated Gene NameRNApolymerase sigma subunit 2
Annotated Gene Symbol(s)SIGB, SIG1, SIG2, SIGA, ATSIG1, ABC1, ATSIG2
Annotation TypeOrtholog
Chromosome Positionchr1:2703461-2706696 | Forward length=572
E-Value1.7E-102
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 119.713197831096
Replicate 211.517970514083
Replicate 316.754642356043
Condition 2: 8 Hour
Replicate 113.012488229107
Replicate 216.994270199301
Replicate 318.981398534462
Condition 3: 24 Hour
Replicate 117.447933493055
Replicate 213.863305588363
Replicate 319.761470517313


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_3319.p1 GENE.R_Transcript_3319~~R_Transcript_3319.p1 ORF type:5prime_partial len:175 (+),score=36.33,Sigma70_r2|PF04542.10|3.8e-17,Sigma70_r3|PF04539.12|5.7e-14 R_Transcript_3319:2-526(+)
GTTCCATCCTTCTCACAGTGTGCAGCTGCTGCAAGTGTTGATCAGAGGACACCAAGAAAGCATGTAAACCATGGTATTATTTGCAAAGATAGGATGATCAAAAGCAACATAAGACTTGTTATATCCATTGCCAAAAATTATCAAGGAGCTGGAATGAACCTTCAGGATCTTGTTCAGGAAGGATGCCGAGGCCTGGTCAGGGGTGCAGAAAAGTTTGATGCTTCCAAAGGTTTTAAGTTCTCAACTTATGCTCAATTGTGGGTAAAACAAGCAATTCGAAAATCTCTTTCTGATCAGTCCAGGACTATCCAGTTACCATTTCACATGGTTGAGGCAACTTATAGAGTAAAAGAAGCAAGGAAACAACTTTATAGCGAAAATGGAAGGCAGCCTGATAATGAGGAAGTTGCAGAGGCAACGGGGCTCTCAATGAAGAGGCTAAATGCTGTGCTTTTGACCCCCAAGGCTCCAAGGTCGCTCGACCAGAAGGTTGGGATGAATATGAATCTTAAACCCTCGGTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_3319.p1 GENE.R_Transcript_3319~~R_Transcript_3319.p1 ORF type:5prime_partial len:175 (+),score=36.33,Sigma70_r2|PF04542.10|3.8e-17,Sigma70_r3|PF04539.12|5.7e-14 R_Transcript_3319:2-526(+)
VPSFSQCAAAASVDQRTPRKHVNHGIICKDRMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAQLWVKQAIRKSLSDQSRTIQLPFHMVEATYRVKEARKQLYSENGRQPDNEEVAEATGLSMKRLNAVLLTPKAPRSLDQKVGMNMNLKPSV*

Click here to download the sequence:
Link to NCBI Protein BLAST