Transcript Information: R_Transcript_331907.p1


Annotated TAIR IDAT5G17290.1
Annotated Gene Nameautophagy protein Apg5 family
Annotated Gene Symbol(s)ATG5, APG5, ATATG5
Annotation TypeHomolog
Chromosome Positionchr5:5687160-5689821 | Reverse length=337
E-Value6E-34
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3037829253371
Replicate 20.95437729164991
Replicate 31.784940591908
Condition 2: 8 Hour
Replicate 11.5899912303406
Replicate 22.0328074401078
Replicate 32.2394844271906
Condition 3: 24 Hour
Replicate 11.0435366921684
Replicate 20.85929580093158
Replicate 31.1370236200986


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_331907.p1 GENE.R_Transcript_331907~~R_Transcript_331907.p1 ORF type:internal len:154 (-),score=24.98,APG5|PF04106.8|2e-14 R_Transcript_331907:2-460(-)
GATGATGATGATAGAGGTAGTGGTTATGTAGTTAGGATTTCTTGCTTTTTTTACCTTATATTAAGATCTTTCCTTCTTGCATGTCTACAATTGCAGGCTACCTACATTATTAATGGAAATTGCAAGAATATTATGAACATGGCCCAATCTGATCAGTCGGAGTTGTGGCGCTCTGTTTTAGATGGCAATTTGGAATTGTTTCTCAAGGTAACATCAAAGCTGAAGCTTGGAGCGATTGAGGATAAATACACTGCAAAATTATATTCGTCATTAAAATCCCGGCCTACTACTGGTAATGCGGATACTCTTGGACTTGTTAAAACAGGCAGAATTCCAGTTAGGTTGTATGTGAGGATTTTTGCTGAGGCGTTTGATGATTTAGAAGATGCTCCAGAACTTGACAGCTGGGAGACAATCTCTTACATAAACAGACCCATTGAGACTGATAAACATGAAGGC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_331907.p1 GENE.R_Transcript_331907~~R_Transcript_331907.p1 ORF type:internal len:154 (-),score=24.98,APG5|PF04106.8|2e-14 R_Transcript_331907:2-460(-)
DDDDRGSGYVVRISCFFYLILRSFLLACLQLQATYIINGNCKNIMNMAQSDQSELWRSVLDGNLELFLKVTSKLKLGAIEDKYTAKLYSSLKSRPTTGNADTLGLVKTGRIPVRLYVRIFAEAFDDLEDAPELDSWETISYINRPIETDKHEG

Click here to download the sequence:
Link to NCBI Protein BLAST