Transcript Information: R_Transcript_3321.p1


Annotated TAIR IDAT1G08540.1
Annotated Gene NameRNApolymerase sigma subunit 2
Annotated Gene Symbol(s)SIGB, SIG1, SIG2, SIGA, ATSIG1, ABC1, ATSIG2
Annotation TypeOrtholog
Chromosome Positionchr1:2703461-2706696 | Forward length=572
E-Value1E-146
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.987510575423
Replicate 21.8020776804407
Replicate 32.6518778055426
Condition 2: 8 Hour
Replicate 12.3459511326702
Replicate 21.9638299421401
Replicate 32.8259992582638
Condition 3: 24 Hour
Replicate 13.8492131878785
Replicate 21.8489438590903
Replicate 32.8397221649667


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_3321.p1 GENE.R_Transcript_3321~~R_Transcript_3321.p1 ORF type:5prime_partial len:501 (+),score=120.84,Sigma70_r2|PF04542.10|2.1e-16 R_Transcript_3321:1-1503(+)
CTGGCTGGTTCTTGCATTTCGGCTCTTCTGATTTCCTTATCCGTTGCGGGGTTTTATCGCATATCAGTTATCACCCCAAGATTTAGCACAGCAGTAGCAGTAGCAGTAGCAGGAGCAACATTAACAGTTCTGTTCTTTCTCTCTCCTCTCTATCCCCTTACCATCTTCCTCTGTACACTACTGCTACTTCAAGCCGGCACCCTGATAATCAGAAGGAAGATGGCATCATCATCATCATCATGTCTATTGCCGCAGTTCAAATGCCACCCCCTTCCTCATCCTTCTACCTCTTCTTCTTCTTCTTCTTCCTTCTTGAGAAATAGAGATTCTGTCTGTTTTCGTACTCATTGTGCTGTTTCAACGCCTCCCCCTCCGATCACTAGTGCGGAAACTGCGGTGCTTGATGTAGAGAAGCTGCGGTTGCCTTATGTTGAAGCCAATTCCAATTCTCTTCCTAGTTATGGCCTTTTGACTTATTCGAGCCCTACAAGTTCTTCGACTGAGGCTAAGTTTGATGCCACATTGGTGGCAAAAACACTTATTGAGGATGAAGAAGCTGTTATTGCTGCTGCAGCTGCTGAAGCACTTGCCCTGGCCAGGGCAGCAGCCAAGCTCGCAAAGGTTGCAGCCCTAATGGCTGGCAGTACCCATTCTGCAAAGCCAGAATCTAACTCTGAAGTACTCTCTGATGGTCAATCTCTCCAGATTAAGAGTGCTCAACTTTTAGAAGATGAGCCATTTGGGATTGCCCAAACTTCTGAGACCGCTGACACTTCTCTTAGAGAAGGCTATTCGATCCAGTACCCAAACTCTGAAACAGATGACTTGGAGCCAACAAGTGAGGAGCTTCAACTCTTGGAGGCTGAACTTTCTGAGAGCATAGCTGTTAGATCAACACGCCAGGTGGAGAGAAAGGCCAGGAGAGCAAGAGCTGCAGAGAAGGTTGCATCTAATGTACCTCCTGTTAAATCAGGGTCTAGCCGCAGGAGACGCACCTCTGTGCAAGAAGTAGACTACTCTGATCCACTGCGCTACTTAAGGGGAACCACCAGCTCATCTAAGCTCCTTACTGCTTCTGAAGAGCTAGAATTGTCAGCAGGAATCCAGGACTTGCTAAAACTAGAAAGGATTCATGATGAGCTGCAAGAAAGATGTGGGGGTGAGCCATCCTTTGCACAGTGGGCAGCTGCAGCAAGTATTGATCAGAGGACACTAAGAAAGCGTGTAAACCATGGTATTATTTGCAAAGATAGGATGATCAAAAGCAACATAAGACTTGTTATATCCATTGCCAAAAATTATCAAGGAGCTGGAATGAACCTTCAGGATCTTGTTCAGGAAGGATGCCGAGGCCTGGTCAGGGGTGCAGAAAAGTCTGATGCTTCCAAAGGTTATAAGTTCTCAACTTTTGCTCATTGGTGGATGAAACAAGCGGTTCGGAAATCTCTTTCTGATCGGTCCAGGACTATCTGGTTACCATTTCACATGGTTGAGGCAACTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_3321.p1 GENE.R_Transcript_3321~~R_Transcript_3321.p1 ORF type:5prime_partial len:501 (+),score=120.84,Sigma70_r2|PF04542.10|2.1e-16 R_Transcript_3321:1-1503(+)
LAGSCISALLISLSVAGFYRISVITPRFSTAVAVAVAGATLTVLFFLSPLYPLTIFLCTLLLLQAGTLIIRRKMASSSSSCLLPQFKCHPLPHPSTSSSSSSSFLRNRDSVCFRTHCAVSTPPPPITSAETAVLDVEKLRLPYVEANSNSLPSYGLLTYSSPTSSSTEAKFDATLVAKTLIEDEEAVIAAAAAEALALARAAAKLAKVAALMAGSTHSAKPESNSEVLSDGQSLQIKSAQLLEDEPFGIAQTSETADTSLREGYSIQYPNSETDDLEPTSEELQLLEAELSESIAVRSTRQVERKARRARAAEKVASNVPPVKSGSSRRRRTSVQEVDYSDPLRYLRGTTSSSKLLTASEELELSAGIQDLLKLERIHDELQERCGGEPSFAQWAAAASIDQRTLRKRVNHGIICKDRMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKSDASKGYKFSTFAHWWMKQAVRKSLSDRSRTIWLPFHMVEAT*

Click here to download the sequence:
Link to NCBI Protein BLAST