Transcript Information: R_Transcript_33224.p1


Annotated TAIR IDAT5G63040.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G48460.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:25288504-25290326 | Forward length=366
E-Value3.1E-113
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.313505405961
Replicate 27.6097702567006
Replicate 39.6353737507625
Condition 2: 8 Hour
Replicate 19.0040614488547
Replicate 28.9325215820609
Replicate 312.917416023503
Condition 3: 24 Hour
Replicate 110.081999999468
Replicate 29.2188648272783
Replicate 310.42271651757


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_33224.p1 GENE.R_Transcript_33224~~R_Transcript_33224.p1 ORF type:complete len:378 (+),score=65.51 R_Transcript_33224:153-1286(+)
ATGGCATTGGGAGCTAGTTGTCATGGAACTGGAAGTGGGTCTCTTTCTTGCTTTGCCACTTCTCTTTCTTCCCCTTCTCAATGTACAAGAATCTACCAGGTTAGCTTAAGAAGAGGATCTTTCCAGAGTAAGCATTACAGCAGGCAGGGCTTAACAACTATTAAAGCATTCCCACAATGGCAGCTCATGCATAAGGAACTCGAATCAACAAGACCACAGAGAAGACATTGTTTCCCAGTGGTTGATGATGTCTTTCCTGATGAAGCAATTGACATAGATGCTTCACTATCAGAAGAAGTCCCTCTGGACAGCGCTCCTGAAGTGGATGAGGAAGACATATCCTCTAATGATTCACATTCCCTGTCCAAGGGAAGTGGTGGAAGGCCAGGATTTGTCTCCTTTTATAATCTTCAGCATGCAAGAGGTGATGCAGTACAACCATTGAGTGTGAGAAAGAACCAGAAGAGCCTTTTATGGTTTGCTGGCCCAGCTGTACTTGTGGCCTCGTTCATTCTTCCGTCACTTTATTTACGCAGGATAATATCTACAATATTTGAAGACTCTCTCTTGACAGATTTTCTTATATTGTTCTTCACCGAAGCCCTGTTCTACTGCGGGGTCGCAGTTTTTCTTCTTCTCATAGACCATCTTTGGAGGCCTGCTAAAACTTTGTCTGGTTCCAGTGGTGATGGAAAGCTAACCACCCAGATGGGAGATCGTATTTCATCGGTGGCAATCTTGATGCTTAGTCTTATAATTCCTATGGTTACGATGGGTTTTGTTTGGCCATGGACTGGTCCTGCAGCTTCTGCTGCTTTGGCTCCCTACTTGGTTGGAATAGTTGTACAGTTTGCTTTTGAGCAGTACGCAAGATATGCTAAATCACCTTCATGGCCTGTCATTCCAGTTGTGTTTCAGGTGTATAGATTACATCAACTGAATCGAGCTGCACAACTGGTGACAGCTCTGTCTTTCACTATTAGAGGAGCTGAGATGACTGCACACAACCTGGCGATCAATAATTCCTTGGGCACACTGTTGAATGTCCTTCAACTTCTTGGCCTCATTTGCATTTGGTCACTCTCTAGCTTCCTCATGAGATTCTTCCCTTCTTCTGCCATTAAGGAGCAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_33224.p1 GENE.R_Transcript_33224~~R_Transcript_33224.p1 ORF type:complete len:378 (+),score=65.51 R_Transcript_33224:153-1286(+)
MALGASCHGTGSGSLSCFATSLSSPSQCTRIYQVSLRRGSFQSKHYSRQGLTTIKAFPQWQLMHKELESTRPQRRHCFPVVDDVFPDEAIDIDASLSEEVPLDSAPEVDEEDISSNDSHSLSKGSGGRPGFVSFYNLQHARGDAVQPLSVRKNQKSLLWFAGPAVLVASFILPSLYLRRIISTIFEDSLLTDFLILFFTEALFYCGVAVFLLLIDHLWRPAKTLSGSSGDGKLTTQMGDRISSVAILMLSLIIPMVTMGFVWPWTGPAASAALAPYLVGIVVQFAFEQYARYAKSPSWPVIPVVFQVYRLHQLNRAAQLVTALSFTIRGAEMTAHNLAINNSLGTLLNVLQLLGLICIWSLSSFLMRFFPSSAIKEQ*

Click here to download the sequence:
Link to NCBI Protein BLAST