Transcript Information: R_Transcript_3323.p1


Annotated TAIR IDAT1G08540.1
Annotated Gene NameRNApolymerase sigma subunit 2
Annotated Gene Symbol(s)SIGB, SIG1, SIG2, SIGA, ATSIG1, ABC1, ATSIG2
Annotation TypeOrtholog
Chromosome Positionchr1:2703461-2706696 | Forward length=572
E-Value4.7E-53
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 21.0712398171581
Replicate 32.337422203689
Condition 2: 8 Hour
Replicate 11.249278823839
Replicate 21.1408613184278
Replicate 30.74088206613824
Condition 3: 24 Hour
Replicate 11.6398433734074
Replicate 22.0254829593387
Replicate 31.340063552259


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_3323.p1 GENE.R_Transcript_3323~~R_Transcript_3323.p1 ORF type:3prime_partial len:98 (+),score=27.79,Sigma70_r3|PF04539.12|7.5e-19 R_Transcript_3323:235-525(+)
ATGGTTGAGGCAACTTATAGAGTAAAAGAAGCAAGGAAACAACTTTATAGCGAAAATGGAAGGCAGCCTGATAATGAGGAAGTTGCAGAGGCAACGGGGCTCTCAATGAAGAGGCTAAATGCTGTGCTTTTGACCCCCAAGGCTCCAAGGTCGCTCGACCAGAAGGTTGGGATGAATATGAATCTTAAACCCTCGGAAGTGATTGCAGACCCTGAAGCAGAAACTGCTGAGGACTTACTGACCAAGCAGTTCATGAAGCAGGATCTTGAGAAGGTGCTGGATACACTCAGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_3323.p1 GENE.R_Transcript_3323~~R_Transcript_3323.p1 ORF type:3prime_partial len:98 (+),score=27.79,Sigma70_r3|PF04539.12|7.5e-19 R_Transcript_3323:235-525(+)
MVEATYRVKEARKQLYSENGRQPDNEEVAEATGLSMKRLNAVLLTPKAPRSLDQKVGMNMNLKPSEVIADPEAETAEDLLTKQFMKQDLEKVLDTLS

Click here to download the sequence:
Link to NCBI Protein BLAST