Transcript Information: R_Transcript_332326.p1


Annotated TAIR IDAT5G39600.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Ribosomal protein L53, mitochondrial (InterPro:IPR019716); Has 50 Blast hits to 50 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:15854188-15854771 | Reverse length=127
E-Value3.9E-34
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.689720716039
Replicate 29.3051785935866
Replicate 310.672457289116
Condition 2: 8 Hour
Replicate 19.7386962858362
Replicate 212.705046500674
Replicate 313.819976267795
Condition 3: 24 Hour
Replicate 114.348629517315
Replicate 215.037676516303
Replicate 310.197680592759


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_332326.p1 GENE.R_Transcript_332326~~R_Transcript_332326.p1 ORF type:internal len:88 (-),score=11.68,MRP_L53|PF10780.5|4.3e-13 R_Transcript_332326:3-263(-)
ATCTTAATCACTAACCAAGGAGCGAAACAGAGAGCCAAAATGTTGAAGTTCTTATCAAAAGTGAAGGTAGATTTCAACGCCCTAGACTCCCGTGCAGTAGCATGTATGGAATTCATAGCCCAATGCAATTCTGGGAAAGCCAAACAATCAAACCCTTCTTGTGAAATCAAAGTGAATCGTCGAACAGATGATCACCCACCTCAAATCAAAGTCACTTTCCTTAATGGGGTTGAACAAGTCTTTGACGCTTCCACCACTTCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_332326.p1 GENE.R_Transcript_332326~~R_Transcript_332326.p1 ORF type:internal len:88 (-),score=11.68,MRP_L53|PF10780.5|4.3e-13 R_Transcript_332326:3-263(-)
ILITNQGAKQRAKMLKFLSKVKVDFNALDSRAVACMEFIAQCNSGKAKQSNPSCEIKVNRRTDDHPPQIKVTFLNGVEQVFDASTTS

Click here to download the sequence:
Link to NCBI Protein BLAST