Transcript Information: R_Transcript_33243.p1


Annotated TAIR IDAT5G08139.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:2616487-2617617 | Forward length=376
E-Value3E-38
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.559915255016
Replicate 29.2491741383692
Replicate 310.679990197563
Condition 2: 8 Hour
Replicate 17.2434069940404
Replicate 210.928791124952
Replicate 311.322869647444
Condition 3: 24 Hour
Replicate 112.032548482687
Replicate 210.070246824637
Replicate 311.542069352576


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_33243.p1 GENE.R_Transcript_33243~~R_Transcript_33243.p1 ORF type:complete len:311 (+),score=102.54,zf-RING_2|PF13639.2|7e+03,zf-RING_2|PF13639.2|4.7e-11,zf-RING_11|PF17123.1|2.3e-08,zf-RING_11|PF17123.1|8.1e+03,zf-rbx1|PF12678.3|7.4e-06 R_Transcript_33243:639-1571(+)
ATGTTGATGTGGATGAGGATGGCTTTAATTTTGGTGGGTTTGTTATGTCTGATTGTGGGGATGAGTTTTTTTGTTGCTAGAAGAGAAAGTAATGGTAATGGTAATGATGAGAATAATAGTAGAATTGGGGTTAGTTGTTCTAGGATAAGTGGGTTAAGGGTAGTTGGGTTAGAGTCAGATTCAGAAGAGGAAGAAGAAGAGTGTAATGATTTGTTGGGGATTGATTTGCATTCTGAGGAGGAAGATTTTGGGGTTGAAAATGTGAATGATATTGATGATATCAATATCCCACTGTGTTGGGAATCATTTCAGTTGGAGGATCATGGGGAAGGCCATAATGATTTTGAGTGGGAGGAGGTTGATGGTAGGGTTGTTGATGAGAGGGAAGTTTTGAGTGTTGTGAATGATCCTGATGAGGACGGTTTGATTTCAGTTTTGCCCATTTCAGGCCCCGAGGATGATGGAGTTGGAGAGAGGGGGAGAGGGTTGGGGAATTTGGAGTGGGAGGTGTTGTTGAATGTTAATAACTTGGAGAGGAATCCCGAGATGGAGAGTGATGCTGGCCCTTTTGGTGATAATGATGATAATTTTTATGCTGCTGAGTATGAGATGATGTTGGGGCAGTTTGCGGATGGTGAGAATGCGTTCTTGAGCAGGCCTGCTGCTTCCAAGTCTGTTGTTGAGAAGTTGCCTTCGGTTGTTACGACTGAAGAGGATGTGCTGAATGAGAGAACAATGTGTGCTGTTTGTAAGGATAATATTGGAGTTGGTGAGGAGGGCAAGCAGTTGCCTTGTTCTCATAGGTACCATGGTGATTGTATCATTCCGTGGTTGGGGATACGGAACACATGTCCTGTGTGCCGCCATGAATTGCCTACCGATGACCCTGATTATGAGCACAGGAGGATTCGGAGAGGTGCTCGTGCCCCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_33243.p1 GENE.R_Transcript_33243~~R_Transcript_33243.p1 ORF type:complete len:311 (+),score=102.54,zf-RING_2|PF13639.2|7e+03,zf-RING_2|PF13639.2|4.7e-11,zf-RING_11|PF17123.1|2.3e-08,zf-RING_11|PF17123.1|8.1e+03,zf-rbx1|PF12678.3|7.4e-06 R_Transcript_33243:639-1571(+)
MLMWMRMALILVGLLCLIVGMSFFVARRESNGNGNDENNSRIGVSCSRISGLRVVGLESDSEEEEEECNDLLGIDLHSEEEDFGVENVNDIDDINIPLCWESFQLEDHGEGHNDFEWEEVDGRVVDEREVLSVVNDPDEDGLISVLPISGPEDDGVGERGRGLGNLEWEVLLNVNNLERNPEMESDAGPFGDNDDNFYAAEYEMMLGQFADGENAFLSRPAASKSVVEKLPSVVTTEEDVLNERTMCAVCKDNIGVGEEGKQLPCSHRYHGDCIIPWLGIRNTCPVCRHELPTDDPDYEHRRIRRGARAP*

Click here to download the sequence:
Link to NCBI Protein BLAST