Transcript Information: R_Transcript_33244.p1


Annotated TAIR IDAT5G08139.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:2616487-2617617 | Forward length=376
E-Value8.6E-66
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.4937614928776
Replicate 26.0677381937008
Replicate 35.7266843990381
Condition 2: 8 Hour
Replicate 14.6612999784893
Replicate 25.8466525915027
Replicate 36.6611415120686
Condition 3: 24 Hour
Replicate 15.160241074117
Replicate 24.0468364936839
Replicate 38.3333921514334


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_33244.p1 GENE.R_Transcript_33244~~R_Transcript_33244.p1 ORF type:complete len:436 (+),score=135.34,zf-RING_2|PF13639.2|1e+04,zf-RING_2|PF13639.2|7.5e-11,zf-RING_11|PF17123.1|3.5e-08,zf-RING_11|PF17123.1|1.6e+04,zf-rbx1|PF12678.3|1.1e-05 R_Transcript_33244:263-1570(+)
ATGGCGGAAGTATCCTTCCTGCATTTCCCAGAAGAAGAAAACGAAGATTTAGTATTAGACGAAATCATAACCCTTGATTGCCCTTGCTACCCTTTATCAAGTGATAGCAATTCAGGAAACCCTAGATCAGGAGGACCCACAATCATCACTACTACTGGTGACCGGAAAAATCAGGTAAATTTTGTCATGGATTTGTTTCATCAACGTGTTGAGCAATCTCATGATGTTTTGGGCACTGATGTTTTTGTGTCAGAACCTGTAATTGAATCATCTTTTGGGGTTATTGAGGATAATTATGATCTGGGTCTTAATTGTTTGGATGTAGAATTAGGGTTAGAGTTAGGGTTAGGGTTAGGATCTGGGGTTACTGATTTTGATGTTGATGTGGATGAGGATGGCTTTAATTTTGGTGGGTTTGTTATGTCTGATTGTGGGGATGAGTTTTTTGTTGCTAGAAGAGAAAGTAATGGCAATGGTAATGATGAGAATAATGGTAGAAGTGGGGGTAGTTGTTCTAGGATAAGTGGGTTAAGGGTAGTTGGGTTAGATTCAAATTCAGAAGAGGAAGATGAAGAGTGTAATGATTTGTTGGGAATTGATTTGCATTCTGAGGAGGAAGATTTTGGGGTTGAAAATGTGAATGATATTGATGATATCAATATCCCACTGTGTTGGGAATCATTTCAGTTGGAGGATCATGGGGAAGGCCATAATGATTTTGAGTGGGAGGAGGTTGATGGTAGGGTTGTTGATGAGAGGGAAGTTTTGAGTGTTGTGAATGATCCTGATGAGGACGGTTTGATTTCAGTTTTGCCCATTTCAGGCCCCGAGGATGATGGAGTTGGAGAGAGGGGGAGAGGGTTGGGGAATTTGGAGTGGGAGGTGTTGTTGAATGTTAATAACTTGGAGAGGAATCCCGAGATGGAGAGTGATGCTGGCCCTTTTGGTGATAATGATGATAATTTTTATGCTGCTGAGTATGAGATGATGTTGGGGCAGTTTGCGGATGGTGAGAATGCGTTCTTGAGCAGGCCTGCTGCTTCCAAGTCTGTTGTTGAGAAGTTGCCTTCGGTTGTTACGACTGAAGAGGATGTGCTGAATGAGAGAACAATGTGTGCTGTTTGTAAGGATAATATTGGAGTTGGTGAGGAGGGCAAGCAGTTGCCTTGTTCTCATAGGTACCATGGTGATTGTATCATTCCGTGGTTGGGGATACGGAACACATGTCCTGTGTGCCGCCATGAATTGCCTACCGATGACCCTGATTATGAGCACAGGAGGATTCGGAGAGGTGCTCGTGCCCCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_33244.p1 GENE.R_Transcript_33244~~R_Transcript_33244.p1 ORF type:complete len:436 (+),score=135.34,zf-RING_2|PF13639.2|1e+04,zf-RING_2|PF13639.2|7.5e-11,zf-RING_11|PF17123.1|3.5e-08,zf-RING_11|PF17123.1|1.6e+04,zf-rbx1|PF12678.3|1.1e-05 R_Transcript_33244:263-1570(+)
MAEVSFLHFPEEENEDLVLDEIITLDCPCYPLSSDSNSGNPRSGGPTIITTTGDRKNQVNFVMDLFHQRVEQSHDVLGTDVFVSEPVIESSFGVIEDNYDLGLNCLDVELGLELGLGLGSGVTDFDVDVDEDGFNFGGFVMSDCGDEFFVARRESNGNGNDENNGRSGGSCSRISGLRVVGLDSNSEEEDEECNDLLGIDLHSEEEDFGVENVNDIDDINIPLCWESFQLEDHGEGHNDFEWEEVDGRVVDEREVLSVVNDPDEDGLISVLPISGPEDDGVGERGRGLGNLEWEVLLNVNNLERNPEMESDAGPFGDNDDNFYAAEYEMMLGQFADGENAFLSRPAASKSVVEKLPSVVTTEEDVLNERTMCAVCKDNIGVGEEGKQLPCSHRYHGDCIIPWLGIRNTCPVCRHELPTDDPDYEHRRIRRGARAP*

Click here to download the sequence:
Link to NCBI Protein BLAST