Transcript Information: R_Transcript_332609.p1


Annotated TAIR IDAT5G64320.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:25723247-25725439 | Reverse length=730
E-Value7E-26
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.17807766785092
Replicate 20.30726293292143
Replicate 30.11174018339587
Condition 2: 8 Hour
Replicate 10.2388864872902
Replicate 20
Replicate 30.44272221025334
Condition 3: 24 Hour
Replicate 10.11198930354978
Replicate 20.32275988620357
Replicate 30.64061574693358


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_332609.p1 GENE.R_Transcript_332609~~R_Transcript_332609.p1 ORF type:internal len:205 (+),score=38.19,PPR_2|PF13041.2|1.6e-08,PPR_2|PF13041.2|69,PPR_2|PF13041.2|1e+02,PPR_2|PF13041.2|5.6e-12,PPR_2|PF13041.2|5.6e-06,PPR_2|PF13041.2|0.0001,PPR_1|PF12854.3|0.055,PPR_1|PF12854.3|0.048,PPR_1|PF12854.3|27,PPR_1|PF12854.3|1.5e+02,PPR_1|PF12854.3|7.5e-11,PPR_1|PF12854.3|0.012,PPR|PF01535.16|0.54,PPR|PF01535.16|3.6e+02,PPR|PF01535.16|14,PPR|PF01535.16|0.43,PPR|PF01535.16|0.00085,PPR|PF01535.16|0.05,PPR_3|PF13812.2|0.73,PPR_3|PF13812.2|8,PPR_3|PF13812.2|5.4e+02,PPR_3|PF13812.2|6.3e+02,PPR_3|PF13812.2|2.9,PPR_3|PF13812.2|0.053 R_Transcript_332609:2-613(+)
TTTCTTTGTGAGGATGGAAGGATTAAGGAAGCTTTGGACATTCTTGCTAAGATGGAGCGAACAAGTTGTGAACCGGATTTGGTGACCTTTAATATTCTTCTCTGTGAACTTTCTCTCCTGGACACGAGAGATAAAATTAATGAGCTGCTTTCTCTTATGGATCAGAAAGGATTGTCACCTGGCTCGTATATGCTCACTGCCTTGGCTGGAGGCATGTTAAAGAGAGGGAAACTAGGAGAAGCTAACAAATTGTTGCGTCATGCTATTACGTTCGGATACAATGTGGACATTGCTGTTTATAACATGTATTTGAACACATTATGTTTTGATCATGGATATGGAGAAGCATTATCTTTGATAGAGAGCATGATTCGTAAAGGTTTTGCACCAAACACTATTTCATACAATACAATTTTGAAAGGATTGTGCTTGAAAGACAGAGTTGATGATGCATATGAGTTCCTAGATAGGCTGCAATGGTCCACGACTGGTCCTGATATAGTCTCCTTCAACACAATTTTATCCAAGGCATGCAAACAGGGGAACTTGTTGATGATACAGAAGCTTATTGATTGCATGGAATCTCACTCAGTGGAGCTTAATTTTGTGAGC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_332609.p1 GENE.R_Transcript_332609~~R_Transcript_332609.p1 ORF type:internal len:205 (+),score=38.19,PPR_2|PF13041.2|1.6e-08,PPR_2|PF13041.2|69,PPR_2|PF13041.2|1e+02,PPR_2|PF13041.2|5.6e-12,PPR_2|PF13041.2|5.6e-06,PPR_2|PF13041.2|0.0001,PPR_1|PF12854.3|0.055,PPR_1|PF12854.3|0.048,PPR_1|PF12854.3|27,PPR_1|PF12854.3|1.5e+02,PPR_1|PF12854.3|7.5e-11,PPR_1|PF12854.3|0.012,PPR|PF01535.16|0.54,PPR|PF01535.16|3.6e+02,PPR|PF01535.16|14,PPR|PF01535.16|0.43,PPR|PF01535.16|0.00085,PPR|PF01535.16|0.05,PPR_3|PF13812.2|0.73,PPR_3|PF13812.2|8,PPR_3|PF13812.2|5.4e+02,PPR_3|PF13812.2|6.3e+02,PPR_3|PF13812.2|2.9,PPR_3|PF13812.2|0.053 R_Transcript_332609:2-613(+)
FLCEDGRIKEALDILAKMERTSCEPDLVTFNILLCELSLLDTRDKINELLSLMDQKGLSPGSYMLTALAGGMLKRGKLGEANKLLRHAITFGYNVDIAVYNMYLNTLCFDHGYGEALSLIESMIRKGFAPNTISYNTILKGLCLKDRVDDAYEFLDRLQWSTTGPDIVSFNTILSKACKQGNLLMIQKLIDCMESHSVELNFVS

Click here to download the sequence:
Link to NCBI Protein BLAST